RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 UBE2CO00762 179 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 TMEM200BQ69YZ2 307 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 Q6P435 159 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 C20orf204Q6ZNR8 217 aa13.34□□□□□ -0.27
HDAC5-201ENST00000225983 A0A0G2JLM5 398 aa13.33□□□□□ -0.27
HDAC5-201ENST00000225983 ERASQ7Z444 233 aa13.33□□□□□ -0.27
HDAC5-201ENST00000225983 SEPSECSQ9HD40 501 aaKnown RBP13.33□□□□□ -0.27
HDAC5-201ENST00000225983 SLC25A15Q9Y619 301 aa13.33□□□□□ -0.27
HDAC5-201ENST00000225983 PHF3Q92576 2039 aaKnown RBP13.33□□□□□ -0.28
HDAC5-201ENST00000225983 PSMB11A5LHX3 300 aa13.33□□□□□ -0.28
HDAC5-201ENST00000225983 FAM181BA6NEQ2 426 aa13.33□□□□□ -0.28
HDAC5-201ENST00000225983 PVRIGQ6DKI7 326 aa13.33□□□□□ -0.28
HDAC5-201ENST00000225983 A0A0G2JRQ6 117 aa13.33□□□□□ -0.28
HDAC5-201ENST00000225983 THBDP07204 575 aa13.33□□□□□ -0.28
HDAC5-201ENST00000225983 PRDM13Q9H4Q3 707 aa13.33□□□□□ -0.28
HDAC5-201ENST00000225983 GEMIN7Q9H840 131 aaKnown RBP13.33□□□□□ -0.28
HDAC5-201ENST00000225983 BEX4Q9NWD9 120 aaPredicted RBP13.33□□□□□ -0.28
HDAC5-201ENST00000225983 HS3ST6Q96QI5 342 aa13.33□□□□□ -0.28
HDAC5-201ENST00000225983 MGST2Q99735 147 aa13.33□□□□□ -0.28
HDAC5-201ENST00000225983 STAG3L3P0CL85 134 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 COLCA1Q6ZS62 124 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 SCGB3A1Q96QR1 104 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 ZNF256Q9Y2P7 627 aaPredicted RBP13.32□□□□□ -0.28
HDAC5-201ENST00000225983 RHOGP84095 191 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 Q6AWC8 147 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 COQ2Q96H96 371 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 NPFFO15130 113 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 TGFAP01135 160 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 PPIFP30405 207 aaKnown RBP13.32□□□□□ -0.28
HDAC5-201ENST00000225983 MEIG1Q5JSS6 88 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 SMIM13P0DJ93 91 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 PSG8Q9UQ74 426 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 LY6DQ14210 128 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 JOSD1Q15040 202 aaPredicted RBP13.32□□□□□ -0.28
HDAC5-201ENST00000225983 TMEM14EPQ6UXP3 125 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 ZNF524Q96C55 264 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 HIST1H2BLQ99880 126 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 VKORC1Q9BQB6 163 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 WDR81Q562E7 1941 aa13.32□□□□□ -0.28
HDAC5-201ENST00000225983 PTPRDP23468 1912 aa13.31□□□□□ -0.28
HDAC5-201ENST00000225983 ITLN2Q8WWU7 325 aaPredicted RBP13.31□□□□□ -0.28
HDAC5-201ENST00000225983 LINC00527Q9UJ94 153 aa13.31□□□□□ -0.28
HDAC5-201ENST00000225983 IGHV2-26A0A0B4J1V2 119 aa13.31□□□□□ -0.28
HDAC5-201ENST00000225983 A0A1B0GW15 77 aa13.31□□□□□ -0.28
HDAC5-201ENST00000225983 FOXL2NBQ6ZUU3 175 aa13.31□□□□□ -0.28
HDAC5-201ENST00000225983 TEX29Q8N6K0 151 aa13.31□□□□□ -0.28
HDAC5-201ENST00000225983 ROS1P08922 2347 aa13.31□□□□□ -0.28
HDAC5-201ENST00000225983 FABP5P3A8MUU1 101 aa13.3□□□□□ -0.28
HDAC5-201ENST00000225983 LEPP41159 167 aa13.3□□□□□ -0.28
HDAC5-201ENST00000225983 ZNF672Q499Z4 452 aaPredicted RBP13.3□□□□□ -0.28
HDAC5-201ENST00000225983 TRAV1-1A0A0B4J248 108 aa13.3□□□□□ -0.28
HDAC5-201ENST00000225983 NDUFA3O95167 84 aa13.3□□□□□ -0.28
HDAC5-201ENST00000225983 IGHV1-8P0DP01 117 aa13.3□□□□□ -0.28
HDAC5-201ENST00000225983 Q6ZRM9 215 aa13.3□□□□□ -0.28
HDAC5-201ENST00000225983 C8orf46Q8TAG6 207 aa13.3□□□□□ -0.28
HDAC5-201ENST00000225983 PEF1Q9UBV8 284 aaKnown RBP13.3□□□□□ -0.28
HDAC5-201ENST00000225983 TSC2P49815 1807 aa13.3□□□□□ -0.28
HDAC5-201ENST00000225983 GPR179Q6PRD1 2367 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 ATP5LO75964 103 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 SRSF4Q08170 494 aaKnown RBP13.29□□□□□ -0.28
HDAC5-201ENST00000225983 TNFRSF18Q9Y5U5 241 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 IGKV1D-17A0A075B6S4 117 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 GZMBP10144 247 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 FBLN7Q53RD9 439 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 HIST3H2BBQ8N257 126 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 DUX3Q96PT4 197 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 AGMATQ9BSE5 352 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 ZNF257Q9Y2Q1 563 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 SELENOKQ9Y6D0 94 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 TRBV24-1A0A075B6N3 115 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 KLRD1Q13241 179 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 MGAMO43451 1857 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 SUMO2P61956 95 aaKnown RBP13.29□□□□□ -0.28
HDAC5-201ENST00000225983 CIRBPQ14011 172 aaKnown RBP13.29□□□□□ -0.28
HDAC5-201ENST00000225983 DMRTA1Q5VZB9 504 aa13.29□□□□□ -0.28
HDAC5-201ENST00000225983 TRBV6-6A0A0A6YYG2 114 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 TMEM178BH3BS89 294 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 NUDT10Q8NFP7 164 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 NUDT11Q96G61 164 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 GNB1LQ9BYB4 327 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 TMEM242Q9NWH2 141 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 PPP1R17O96001 155 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 LINC01551Q86U37 167 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 FER1L5A0AVI2 2057 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 A0A1B0GW64 132 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 RIF1Q5UIP0 2472 aaKnown RBP13.28□□□□□ -0.28
HDAC5-201ENST00000225983 A0A1W2PRX2 142 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 TMEM50AO95807 157 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 RNASE1P07998 156 aaKnown RBP13.28□□□□□ -0.28
HDAC5-201ENST00000225983 ADCYAP1P18509 176 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 NTF4P34130 210 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 PAPPA-AS1Q5QFB9 102 aa13.28□□□□□ -0.28
HDAC5-201ENST00000225983 TTC9CQ8N5M4 171 aa13.27□□□□□ -0.28
HDAC5-201ENST00000225983 GAFA1Q96PS6 74 aa13.27□□□□□ -0.28
HDAC5-201ENST00000225983 SPTBN1Q01082 2364 aaKnown RBP13.27□□□□□ -0.28
HDAC5-201ENST00000225983 EXOC3-AS1Q8N2X6 119 aa13.27□□□□□ -0.28
HDAC5-201ENST00000225983 TSKUQ8WUA8 353 aa13.27□□□□□ -0.28
HDAC5-201ENST00000225983 A0A0G2JNJ9 132 aa13.27□□□□□ -0.29
HDAC5-201ENST00000225983 PF4P02776 101 aa13.27□□□□□ -0.29
HDAC5-201ENST00000225983 PSG1P11464 419 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms