RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 VDAC1P21796 283 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 FKBP1AP62942 108 aaKnown RBP3.58□□□□□ -1.84
SCN3A-209ENST00000639244 ANKRD34AQ69YU3 496 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-209ENST00000639244 SAP25Q8TEE9 199 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 DDB2Q92466 427 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 FOXB1Q99853 325 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 IMUPQ9GZP8 106 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 BMPR1BO00238 502 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 IGHMP01871 453 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 PTGDSP41222 190 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 SLC25A47Q6Q0C1 308 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 PRSS41Q7RTY9 318 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 EMC6Q9BV81 110 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 CDIP1Q9H305 208 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 PCTPQ9UKL6 214 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 F11RQ9Y624 299 aaKnown RBP3.58□□□□□ -1.84
SCN3A-209ENST00000639244 OOSP1A8MZH6 123 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 TACSTD2P09758 323 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 NTF4P34130 210 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 UBE2L3P68036 154 aaKnown RBP3.58□□□□□ -1.84
SCN3A-209ENST00000639244 CDK5R1Q15078 307 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 FAM201AQ5SY85 155 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 AMTNQ6UX39 209 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 C11orf98E9PRG8 122 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 RFLNAQ6ZTI6 216 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 AAED1Q7RTV5 226 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 SLC22A18ASQ8N1D0 253 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 IKZF5Q9H5V7 419 aa3.58□□□□□ -1.84
SCN3A-209ENST00000639244 CST7O76096 145 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 IGHV3-7P01780 117 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 IGF1P05019 195 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 IGFBP3P17936 291 aaPredicted RBP3.57□□□□□ -1.84
SCN3A-209ENST00000639244 VEGFBP49765 207 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 ECSCRQ19T08 205 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 LINC01559Q495D7 138 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 FKBP1CQ5VVH2 108 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 ACP7Q6ZNF0 438 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 AMN1Q8IY45 258 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 NFAM1Q8NET5 270 aaPredicted RBP3.57□□□□□ -1.84
SCN3A-209ENST00000639244 A0A0D9SEW6 157 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 J3QQQ9 107 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 C3orf79P0CE67 100 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 IGLL1P15814 213 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 ZNF141Q15928 474 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 C1orf220Q5T0J3 134 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 NCBP2-AS2Q69YL0 99 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 NOXRED1Q6NXP6 359 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 FAM90A26D6RGX4 464 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 CTGFP29279 349 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 NKG7Q16617 165 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 IGFBPL1Q8WX77 278 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 NABP1Q96AH0 204 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 TAC3Q9UHF0 121 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 FGF6P10767 208 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 SPANXN4Q5MJ08 99 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 RTP4Q96DX8 246 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 TRAV26-2A0A0B4J265 109 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 C15orf61A6NNL5 157 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 LGALS3P17931 250 aaKnown RBP3.57□□□□□ -1.84
SCN3A-209ENST00000639244 HOXD3P31249 432 aaPredicted RBP3.57□□□□□ -1.84
SCN3A-209ENST00000639244 HBG1P69891 147 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 KLF5Q13887 457 aaPredicted RBP3.57□□□□□ -1.84
SCN3A-209ENST00000639244 ICAM4Q14773 271 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 NMNAT3Q96T66 252 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 C21orf62Q9NYP8 219 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 DSPPQ9NZW4 1301 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 VWC2LB2RUY7 222 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 TMEM178BH3BS89 294 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 ARL16Q0P5N6 197 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 DRAM1Q8N682 238 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 APOBEC4Q8WW27 367 aaKnown RBP3.57□□□□□ -1.84
SCN3A-209ENST00000639244 SDF2L1Q9HCN8 221 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 SELENOKQ9Y6D0 94 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 KIAA1549LQ6ZVL6 1849 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 LOC730098B7Z3J9 87 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 SPINT2O43291 252 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 CCL14Q16627 93 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 PHLDA2Q53GA4 152 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 CYTL1Q9NRR1 136 aa3.57□□□□□ -1.84
SCN3A-209ENST00000639244 KLF13Q9Y2Y9 288 aaPredicted RBP3.57□□□□□ -1.84
SCN3A-209ENST00000639244 RPL11P62913 178 aaKnown RBP3.56□□□□□ -1.84
SCN3A-209ENST00000639244 ZNF260Q3ZCT1 412 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 Q6ZSR3 168 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 OR2T6Q8NHC8 308 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 CLDND2Q8NHS1 167 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 NPIPB3Q92617 1050 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 C2orf50Q96LR7 162 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 TMEM59Q9BXS4 323 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 TPSG1Q9NRR2 321 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 TNFRSF19Q9NS68 423 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 Q9UF83 564 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 ZNF823P16415 610 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 POU3F1Q03052 451 aaPredicted RBP3.56□□□□□ -1.84
SCN3A-209ENST00000639244 SLC25A44Q96H78 314 aaPredicted RBP3.56□□□□□ -1.84
SCN3A-209ENST00000639244 MRPL18Q9H0U6 180 aaKnown RBP3.56□□□□□ -1.84
SCN3A-209ENST00000639244 CPAMD8Q8IZJ3 1885 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 SAA2-SAA4A0A096LPE2 208 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 SYS1-DBNDD2H3BUS1 97 aa3.56□□□□□ -1.84
SCN3A-209ENST00000639244 CGAP01215 116 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms