RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 WFDC8Q8IUA0 241 aa9.13□□□□□ -0.95
VARS2-213ENST00000625423 NHLRC2Q8NBF2 726 aa9.13□□□□□ -0.95
VARS2-213ENST00000625423 NUP37Q8NFH4 326 aa9.13□□□□□ -0.95
VARS2-213ENST00000625423 FLYWCH2Q96CP2 140 aaKnown RBP9.13□□□□□ -0.95
VARS2-213ENST00000625423 LINC00479Q96M42 142 aa9.13□□□□□ -0.95
VARS2-213ENST00000625423 ZNF714Q96N38 554 aa9.13□□□□□ -0.95
VARS2-213ENST00000625423 SLC25A2Q9BXI2 301 aa9.13□□□□□ -0.95
VARS2-213ENST00000625423 SNHG12Q9BXW3 62 aa9.13□□□□□ -0.95
VARS2-213ENST00000625423 OSTCQ9NRP0 149 aa9.13□□□□□ -0.95
VARS2-213ENST00000625423 SERTAD4Q9NUC0 356 aa9.13□□□□□ -0.95
VARS2-213ENST00000625423 UBE2L3P68036 154 aaKnown RBP9.12□□□□□ -0.95
VARS2-213ENST00000625423 Q0VG73 95 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 IBA57Q5T440 356 aaKnown RBP9.12□□□□□ -0.95
VARS2-213ENST00000625423 IGF2-ASQ6U949 168 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 TMEM108Q6UXF1 575 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 OR5AU1Q8NGC0 362 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 OR5AN1Q8NGI8 311 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 H1FXQ92522 213 aaKnown RBP9.12□□□□□ -0.95
VARS2-213ENST00000625423 FAM167A-AS1Q96KT0 104 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 IGF2BP2-AS1Q96M15 143 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 SAMD10Q9BYL1 202 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 GNB4Q9HAV0 340 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 TRBV9A0A0B4J1U6 114 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 PSMB11A5LHX3 300 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 ISLRO14498 428 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 PPOXP50336 477 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 ADIPOQQ15848 244 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 TPTE2P1Q5T6R2 138 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 CYB5R2Q6BCY4 276 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 CACNG8Q8WXS5 425 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 ATG101Q9BSB4 218 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 DNAJC4Q9NNZ3 241 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 C17orf100A8MU93 164 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 PYYP10082 97 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 WT1-ASQ06250 92 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 TMEM177Q53S58 311 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 MRPL54Q6P161 138 aaKnown RBP9.12□□□□□ -0.95
VARS2-213ENST00000625423 OR10X1Q8NGY0 326 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 FAM57AQ8TBR7 257 aa9.12□□□□□ -0.95
VARS2-213ENST00000625423 FNDC4Q9H6D8 234 aaPredicted RBP9.12□□□□□ -0.95
VARS2-213ENST00000625423 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
VARS2-213ENST00000625423 CRYABP02511 175 aaKnown RBP9.11□□□□□ -0.95
VARS2-213ENST00000625423 MEF2CQ06413 473 aaPredicted RBP9.11□□□□□ -0.95
VARS2-213ENST00000625423 TMEM136Q6ZRR5 245 aa9.11□□□□□ -0.95
VARS2-213ENST00000625423 FAM103A1Q9BTL3 118 aaKnown RBP9.11□□□□□ -0.95
VARS2-213ENST00000625423 MRPL32Q9BYC8 188 aaKnown RBP9.11□□□□□ -0.95
VARS2-213ENST00000625423 AKAP6Q13023 2319 aa9.11□□□□□ -0.95
VARS2-213ENST00000625423 ARFGEF3Q5TH69 2177 aa9.11□□□□□ -0.95
VARS2-213ENST00000625423 DPRXA6NFQ7 191 aa9.11□□□□□ -0.95
VARS2-213ENST00000625423 CGB1A6NKQ9 187 aa9.11□□□□□ -0.95
VARS2-213ENST00000625423 CCL17Q92583 94 aa9.11□□□□□ -0.95
VARS2-213ENST00000625423 NPIPB3Q92617 1050 aa9.11□□□□□ -0.95
VARS2-213ENST00000625423 DMXL2Q8TDJ6 3036 aa9.11□□□□□ -0.95
VARS2-213ENST00000625423 COX7A2P2O60397 106 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 USF1P22415 310 aaPredicted RBP9.1□□□□□ -0.95
VARS2-213ENST00000625423 NUTF2P61970 127 aaKnown RBP9.1□□□□□ -0.95
VARS2-213ENST00000625423 RPL19P84098 196 aaKnown RBP9.1□□□□□ -0.95
VARS2-213ENST00000625423 WDR73Q6P4I2 378 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 LYPD2Q6UXB3 125 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 OR4C13Q8NGP0 309 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 VN1R17PQ8TDU5 208 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 ZNF355PQ9NSJ1 428 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 MED13LQ71F56 2210 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 A0A1W2PN81 502 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 PATE2Q6UY27 113 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 TEX43Q6ZNM6 134 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 TMEM167AQ8TBQ9 72 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 FAM168AQ92567 244 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 ZNF430Q9H8G1 570 aaPredicted RBP9.1□□□□□ -0.95
VARS2-213ENST00000625423 SAP30LQ9HAJ7 183 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 RNF114Q9Y508 228 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 PPIAL4EA0A075B759 164 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 PPIAL4DF5H284 164 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 C16orf97H3BN30 126 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 MT-ND6P03923 174 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 PPIAL4FP0DN26 164 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 BSPH1Q075Z2 132 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 ZNF705AQ6ZN79 300 aaPredicted RBP9.1□□□□□ -0.95
VARS2-213ENST00000625423 SIGLECL1Q8N7X8 197 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 SSBP3Q9BWW4 388 aaPredicted RBP9.1□□□□□ -0.95
VARS2-213ENST00000625423 MRPL36Q9P0J6 103 aaKnown RBP9.1□□□□□ -0.95
VARS2-213ENST00000625423 PPIAL4AQ9Y536 164 aa9.1□□□□□ -0.95
VARS2-213ENST00000625423 A0A0G2JNJ9 132 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 SMIM27A0A1W2PRY6 76 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 M0R143 59 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 REG1AP05451 166 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 C10orf113Q5VZT2 155 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 RCHY1Q96PM5 261 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 RNF2Q99496 336 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 PAXXQ9BUH6 204 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 Q9UFV3 132 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 PAM16Q9Y3D7 125 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 AMMECR1Q9Y4X0 333 aaPredicted RBP9.09□□□□□ -0.95
VARS2-213ENST00000625423 TRAV34A0A0B4J273 112 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 TMEM178BH3BS89 294 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 TCAPO15273 167 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 PLAUP00749 431 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 IGLV2-23P01705 113 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 AMY1AP04745 511 aa9.09□□□□□ -0.95
VARS2-213ENST00000625423 GPX1P07203 203 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms