RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 ENSAO43768 121 aaKnown RBP6.71□□□□□ -1.33
SND1-IT1-201ENST00000623342 PDLIM4P50479 330 aa6.71□□□□□ -1.33
SND1-IT1-201ENST00000623342 RPL15P61313 204 aaKnown RBP6.71□□□□□ -1.33
SND1-IT1-201ENST00000623342 DNLZQ5SXM8 178 aa6.71□□□□□ -1.33
SND1-IT1-201ENST00000623342 LINC01560Q8TB33 94 aa6.71□□□□□ -1.33
SND1-IT1-201ENST00000623342 EAF1Q96JC9 268 aaPredicted RBP6.71□□□□□ -1.33
SND1-IT1-201ENST00000623342 RITA1Q96K30 269 aa6.71□□□□□ -1.33
SND1-IT1-201ENST00000623342 PFDN5Q99471 154 aa6.71□□□□□ -1.33
SND1-IT1-201ENST00000623342 TRAPPC1Q9Y5R8 145 aa6.71□□□□□ -1.33
SND1-IT1-201ENST00000623342 PSMB11A5LHX3 300 aa6.71□□□□□ -1.34
SND1-IT1-201ENST00000623342 HELTA6NFD8 242 aa6.71□□□□□ -1.34
SND1-IT1-201ENST00000623342 FAM90A27PA6NNH2 459 aa6.71□□□□□ -1.34
SND1-IT1-201ENST00000623342 CRYBB3P26998 211 aa6.71□□□□□ -1.34
SND1-IT1-201ENST00000623342 CA7P43166 264 aa6.71□□□□□ -1.34
SND1-IT1-201ENST00000623342 PRRX1P54821 245 aa6.71□□□□□ -1.34
SND1-IT1-201ENST00000623342 FBXL19-AS1Q494R0 122 aa6.71□□□□□ -1.34
SND1-IT1-201ENST00000623342 MUC15Q8N387 334 aa6.71□□□□□ -1.34
SND1-IT1-201ENST00000623342 FNDC4Q9H6D8 234 aaPredicted RBP6.71□□□□□ -1.34
SND1-IT1-201ENST00000623342 DNAJC4Q9NNZ3 241 aa6.71□□□□□ -1.34
SND1-IT1-201ENST00000623342 MSRB2Q9Y3D2 182 aa6.71□□□□□ -1.34
SND1-IT1-201ENST00000623342 TRAV9-1A0A075B6T8 112 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 IGHV2-26A0A0B4J1V2 119 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 A0A1W2PPI3 338 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 A0A1W2PRE2 83 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 TCRBV4S1A1TA0A5B7 111 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 FSTL3O95633 263 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 OR10J4P0C629 311 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 GNG4P50150 75 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 CNN1P51911 297 aaKnown RBP6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 SSBP2P81877 361 aaPredicted RBP6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 MRGPRG-AS1Q2M3A8 158 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 CDPF1Q6NVV7 123 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 MRPL41Q8IXM3 137 aaKnown RBP6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 TEX45Q8NA69 505 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 THAP8Q8NA92 274 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 OR1L4Q8NGR5 311 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 NPIPB3Q92617 1050 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 TPSG1Q9NRR2 321 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 IL36BQ9NZH7 164 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 RAXQ9Y2V3 346 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 ARFGEF3Q5TH69 2177 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 IGHV3-72A0A0B4J1Y9 119 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 GGTLC3B5MD39 225 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 LYNX1G3V0Z9 82 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 COX7A2P2O60397 106 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 IGLV1-47P01700 117 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 AMBPP02760 352 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 LYNX1P0DP58 116 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 HIST1H1BP16401 226 aaKnown RBP6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 ZNF90Q03938 601 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 CENPWQ5EE01 88 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 ZNF841Q6ZN19 808 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 MMD2Q8IY49 270 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 FAM167A-AS1Q96KT0 104 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 SLC25A2Q9BXI2 301 aa6.7□□□□□ -1.34
SND1-IT1-201ENST00000623342 USP24Q9UPU5 2620 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 BPIFB3P59826 476 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 ERVFC1-1P60608 527 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 SELENOTP62341 195 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 SUMO1P63165 101 aaKnown RBP6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 PRSS8Q16651 343 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 ZNF672Q499Z4 452 aaPredicted RBP6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 C10orf113Q5VZT2 155 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 ETFRF1Q6IPR1 90 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 CLEC7AQ9BXN2 247 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 MYO18BQ8IUG5 2567 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 IGKV1D-37A0A075B6S9 117 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 TRAV5A0A0B4J249 113 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 IGLC7A0M8Q6 106 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 BUB1B-PAK6H3BSN5 160 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 SLC17A3O00476 420 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 CCL21O00585 134 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 SIAH2O43255 324 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 RBP4P02753 201 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 REG1AP05451 166 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 CRYGBP07316 175 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 UCNP55089 124 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 YPEL3P61236 119 aaPredicted RBP6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 UBE2L3P68036 154 aaKnown RBP6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 SSX2Q16385 188 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 MORN5Q5VZ52 161 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 PVRIGQ6DKI7 326 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 BEND2Q8NDZ0 799 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 OR5AU1Q8NGC0 362 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 INSIG2Q9Y5U4 225 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 MED13LQ71F56 2210 aa6.69□□□□□ -1.34
SND1-IT1-201ENST00000623342 EPG5Q9HCE0 2579 aa6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 PPIAL4CA0A0B4J2A2 164 aa6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 IGHV1-3A0A0C4DH29 117 aa6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 IGHV3-48P01763 117 aa6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 PPIAL4GP0DN37 164 aa6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 GRNP28799 593 aaKnown RBP6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 RPL27AP46776 148 aaKnown RBP6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 DLX1P56177 255 aa6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 OR5I1Q13606 314 aa6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 JOSD1Q15040 202 aaPredicted RBP6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 TNXAQ16473 311 aa6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 RPEL1Q2QD12 228 aa6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 TIGITQ495A1 244 aa6.68□□□□□ -1.34
SND1-IT1-201ENST00000623342 OR5R1Q8NH85 324 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms