RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 TIMM50Q3ZCQ8 353 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 Q499Y3 187 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 IGSF11Q5DX21 431 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 FFAR4Q5NUL3 377 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 C1orf100Q5SVJ3 147 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 C1orf194Q5T5A4 169 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 OR2G6Q5TZ20 316 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 GDF5OSQ5U4N7 250 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 FAM78BQ5VT40 261 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 MEDAGQ5VYS4 303 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 AWAT2Q6E213 333 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 AMTNQ6UX39 209 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 KCTD9Q7L273 389 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 NEGR1Q7Z3B1 354 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 TMEM144Q7Z5S9 345 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 LHFPL3Q86UP9 236 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 H1FOOQ8IZA3 346 aaPredicted RBP1.54□□□□□ -2.16
CPNE3-211ENST00000621526 JAGN1Q8N5M9 183 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 MS4A15Q8N5U1 240 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 SLC24A4Q8NFF2 622 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 OR4B1Q8NGF8 309 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 OR52E5Q8NH55 327 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 Q8WTZ3 238 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 ANP32BQ92688 251 aaKnown RBP1.54□□□□□ -2.16
CPNE3-211ENST00000621526 TMEM230Q96A57 120 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 C16orf74Q96GX8 76 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 LINC01587Q99440 93 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 SLC29A1Q99808 456 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 CMSS1Q9BQ75 279 aaKnown RBP1.54□□□□□ -2.16
CPNE3-211ENST00000621526 URM1Q9BTM9 101 aaKnown RBP1.54□□□□□ -2.16
CPNE3-211ENST00000621526 SLC35B3Q9H1N7 401 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 PLEKHA2Q9HB19 425 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 HRASLSQ9HDD0 168 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 NOP10Q9NPE3 64 aaKnown RBP1.54□□□□□ -2.16
CPNE3-211ENST00000621526 MRPS18AQ9NVS2 196 aaKnown RBP1.54□□□□□ -2.16
CPNE3-211ENST00000621526 KLK11Q9UBX7 282 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 CLEC2DQ9UHP7 191 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 PFDN2Q9UHV9 154 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 AK3Q9UIJ7 227 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 VAX2Q9UIW0 290 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 OR2W1Q9Y3N9 320 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 COX11Q9Y6N1 276 aa1.54□□□□□ -2.16
CPNE3-211ENST00000621526 TRAV8-7A0A075B6U6 113 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 FOXI3A8MTJ6 420 aaPredicted RBP1.53□□□□□ -2.16
CPNE3-211ENST00000621526 TMEM14DPA8MWL7 114 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 C9JCJ5 164 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 INS-IGF2F8WCM5 200 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 H7BYZ3 331 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 ISLRO14498 428 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 PAX4O43316 350 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 GSTZ1O43708 216 aaPredicted RBP1.53□□□□□ -2.16
CPNE3-211ENST00000621526 CLN5O75503 358 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 SNAPC5O75971 98 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 TOMM40O96008 361 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 INSP01308 110 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 IGKV3-20P01619 116 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 RLN2P04090 185 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 PRM2P04554 102 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 CD1AP06126 327 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 FCER2P06734 321 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 HNRNPCP07910 306 aaKnown RBP eCLIP1.53□□□□□ -2.16
CPNE3-211ENST00000621526 CD3GP09693 182 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 PSMB3P49720 205 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 TIRAPP58753 221 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 YPEL3P61236 119 aaPredicted RBP1.53□□□□□ -2.16
CPNE3-211ENST00000621526 QRFPP83859 136 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 ERHP84090 104 aaKnown RBP1.53□□□□□ -2.16
CPNE3-211ENST00000621526 PRCDQ00LT1 54 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 LAGE3Q14657 143 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 SPCS2Q15005 226 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 P2RY14Q15391 338 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 LINC01556Q5JQF7 62 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 SPINK6Q6UWN8 80 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 CYP2R1Q6VVX0 501 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 SIGLEC15Q6ZMC9 328 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 SH2D6Q7Z4S9 175 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 AMIGO2Q86SJ2 522 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 DHFR2Q86XF0 187 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 CCDC28AQ8IWP9 274 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 IQCF2Q8IXL9 164 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 ADGRG5Q8IZF4 528 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 SPAG16Q8N0X2 631 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 NKAIN3Q8N8D7 197 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 OR4X1Q8NH49 305 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 RNASE8Q8TDE3 154 aaKnown RBP1.53□□□□□ -2.16
CPNE3-211ENST00000621526 TMEM263Q8WUH6 116 aaKnown RBP1.53□□□□□ -2.16
CPNE3-211ENST00000621526 LGALS12Q96DT0 336 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 CYYR1Q96J86 154 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 PGLYRP3Q96LB9 341 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 LINC00052Q96N35 136 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 C20orf144Q9BQM9 153 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 GINS4Q9BRT9 223 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 TMEM59Q9BXS4 323 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 MRPL32Q9BYC8 188 aaKnown RBP1.53□□□□□ -2.16
CPNE3-211ENST00000621526 LPAR5Q9H1C0 372 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 RPRMQ9NS64 109 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 FGFR1OP2Q9NVK5 253 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 DOK5Q9P104 306 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 TAGLN3Q9UI15 199 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 PRO0255Q9UI72 69 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms