RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 NUDT11Q96G61 164 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 HSBP1O75506 76 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 SSBP2P81877 361 aaPredicted RBP15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 TBR1Q16650 682 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 SLC25A48Q6ZT89 311 aaKnown RBP15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 OR8B3Q8NGG8 313 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 OR8B2Q96RD0 313 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 TNFRSF19Q9NS68 423 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 IGHV2-26A0A0B4J1V2 119 aa15.88■□□□□ 0.13
PDLIM3-212ENST00000620787 CCL25O15444 150 aa15.88■□□□□ 0.13
PDLIM3-212ENST00000620787 HINT1P49773 126 aaPredicted RBP15.88■□□□□ 0.13
PDLIM3-212ENST00000620787 ALKBH7Q9BT30 221 aaPredicted RBP15.88■□□□□ 0.13
PDLIM3-212ENST00000620787 TRAV9-2A0A087WT02 112 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 C20orf202A1L168 122 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 M0R2Z0 102 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 PEX7O00628 323 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 OR2J3O76001 311 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 DHRS13Q6UX07 377 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 FAM169BQ8N8A8 192 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 LINC00574Q9H8X3 128 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 SAP30LQ9HAJ7 183 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 CADP27708 2225 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 DLL1O00548 723 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 RPL8P62917 257 aaKnown RBP15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 CACNG8Q8WXS5 425 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 GAFA1Q96PS6 74 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 C7orf69Q9H7B7 122 aa15.87■□□□□ 0.13
PDLIM3-212ENST00000620787 C2orf70A6NJV1 201 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 GPR6P46095 362 aaPredicted RBP15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 C21orf62-AS1Q17RA5 79 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 PAXXQ9BUH6 204 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 SSBP4Q9BWG4 385 aaPredicted RBP15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 NDUFA4L2Q9NRX3 87 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 DKK4Q9UBT3 224 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 RPUSD1Q9UJJ7 312 aaKnown RBP15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 PROCRQ9UNN8 238 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 H0YJW9 148 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 KLF3P57682 345 aaPredicted RBP15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 Q56UQ5 140 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 ALKBH2Q6NS38 261 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 RNASEKQ6P5S7 137 aaKnown RBP15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 UNQ5815/PRO19632Q6UWF5 114 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 PATE2Q6UY27 113 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 Q6ZVH6 145 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 RND1Q92730 232 aa15.86■□□□□ 0.13
PDLIM3-212ENST00000620787 UBE2G1P62253 170 aa15.85■□□□□ 0.13
PDLIM3-212ENST00000620787 ZNF841Q6ZN19 808 aa15.85■□□□□ 0.13
PDLIM3-212ENST00000620787 SPATA12Q7Z6I5 190 aa15.85■□□□□ 0.13
PDLIM3-212ENST00000620787 COLQQ9Y215 455 aaPredicted RBP15.85■□□□□ 0.13
PDLIM3-212ENST00000620787 VWC2LB2RUY7 222 aa15.85■□□□□ 0.13
PDLIM3-212ENST00000620787 CORTO00230 105 aa15.85■□□□□ 0.13
PDLIM3-212ENST00000620787 COX7A2P2O60397 106 aa15.85■□□□□ 0.13
PDLIM3-212ENST00000620787 TOMM40O96008 361 aa15.85■□□□□ 0.13
PDLIM3-212ENST00000620787 IGLL1P15814 213 aa15.85■□□□□ 0.13
PDLIM3-212ENST00000620787 HES3Q5TGS1 186 aa15.85■□□□□ 0.13
PDLIM3-212ENST00000620787 SPENQ96T58 3664 aaKnown RBP15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 E7EUB6 86 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 FSTL3O95633 263 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 GATA4P43694 442 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 PTTG1IPP53801 180 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 C10orf113Q5VZT2 155 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 PRR27Q6MZM9 219 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 VHLLQ6RSH7 139 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 KIR3DL3Q8N743 410 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 FAM216BQ8N7L0 139 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 DEFB108BQ8NET1 73 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 OR4F17Q8NGA8 305 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 FXYD5Q96DB9 178 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 ASCL3Q9NQ33 180 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 RNF7Q9UBF6 113 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 COX11Q9Y6N1 276 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 A0A1B0GXF2 115 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 A0A1W2PN81 502 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 HIGD1CA8MV81 97 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 M0R1B8 84 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 SARAFQ96BY9 339 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 URB1-AS1Q96HZ7 61 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 CCL13Q99616 98 aa15.84■□□□□ 0.13
PDLIM3-212ENST00000620787 GPR179Q6PRD1 2367 aa15.83■□□□□ 0.13
PDLIM3-212ENST00000620787 PCP4P48539 62 aa15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 ZNF833PQ6ZTB9 187 aa15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 OR1L4Q8NGR5 311 aa15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 MRPL20Q9BYC9 149 aaKnown RBP15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 FNDC4Q9H6D8 234 aaPredicted RBP15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 GLRXP35754 106 aa15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 MYCNOSP40205 109 aa15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 CAMPP49913 170 aa15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 GNG5P63218 68 aa15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 ERHP84090 104 aaKnown RBP15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 ATP5L2Q7Z4Y8 100 aa15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 OSR1Q8TAX0 266 aaPredicted RBP15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 HARBI1Q96MB7 349 aa15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 CHRDL1Q9BU40 450 aa15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 ZNF430Q9H8G1 570 aaPredicted RBP15.83■□□□□ 0.12
PDLIM3-212ENST00000620787 IGKV1D-37A0A075B6S9 117 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 HIST1H1EP10412 219 aaKnown RBP15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 TMEM30BQ3MIR4 351 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 FDCSPQ8NFU4 85 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 DYSFO75923 2080 aa15.82■□□□□ 0.12
PDLIM3-212ENST00000620787 IGLV3-9A0A075B6K5 115 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms