RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 C21orf62Q9NYP8 219 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 THYN1Q9P016 225 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 STRAPQ9Y3F4 350 aaKnown RBP10.48□□□□□ -0.73
NEK3-210ENST00000620675 G3V3Q6 166 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 SMLR1H3BR10 107 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 ADMP35318 185 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 FHL3Q13643 280 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 OR8G2PQ6IF36 304 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 PRSS54Q6PEW0 395 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 VN1R17PQ8TDU5 208 aa10.48□□□□□ -0.73
NEK3-210ENST00000620675 BSCL2Q96G97 398 aaPredicted RBP10.48□□□□□ -0.73
NEK3-210ENST00000620675 PEF1Q9UBV8 284 aaKnown RBP10.48□□□□□ -0.73
NEK3-210ENST00000620675 IGSF23A1L1A6 192 aa10.47□□□□□ -0.73
NEK3-210ENST00000620675 OR8U8P0C7N1 319 aa10.47□□□□□ -0.73
NEK3-210ENST00000620675 CYCSP99999 105 aaKnown RBP10.47□□□□□ -0.73
NEK3-210ENST00000620675 CXorf58Q96LI9 332 aa10.47□□□□□ -0.73
NEK3-210ENST00000620675 MBD2Q9UBB5 411 aa10.47□□□□□ -0.73
NEK3-210ENST00000620675 SORL1Q92673 2214 aa10.47□□□□□ -0.73
NEK3-210ENST00000620675 L7N2F9 121 aa10.46□□□□□ -0.73
NEK3-210ENST00000620675 CST7O76096 145 aa10.46□□□□□ -0.73
NEK3-210ENST00000620675 OR2C1O95371 312 aa10.46□□□□□ -0.73
NEK3-210ENST00000620675 HOXD3P31249 432 aaPredicted RBP10.46□□□□□ -0.73
NEK3-210ENST00000620675 CAV2P51636 162 aa10.46□□□□□ -0.73
NEK3-210ENST00000620675 VAMP2P63027 116 aa10.46□□□□□ -0.73
NEK3-210ENST00000620675 CD69Q07108 199 aa10.46□□□□□ -0.73
NEK3-210ENST00000620675 ZNF616Q08AN1 781 aa10.46□□□□□ -0.73
NEK3-210ENST00000620675 ACSM6Q6P461 480 aa10.46□□□□□ -0.73
NEK3-210ENST00000620675 RNASEH2CQ8TDP1 164 aaKnown RBP10.46□□□□□ -0.73
NEK3-210ENST00000620675 DNAH3Q8TD57 4116 aa10.46□□□□□ -0.73
NEK3-210ENST00000620675 TRBV7-1A0A0A6YYK4 115 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 M0QZ24 198 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 CYB5BO43169 146 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 TSC22D2O75157 780 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 HSPB1P04792 205 aaKnown RBP10.46□□□□□ -0.74
NEK3-210ENST00000620675 CTSGP08311 255 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 ARL3P36405 182 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 BCAP31P51572 246 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 RND2P52198 227 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 TAS2R30P59541 319 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 Q56UQ5 140 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 SLC16A13Q7RTY0 426 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 DLX4Q92988 240 aaPredicted RBP10.46□□□□□ -0.74
NEK3-210ENST00000620675 ACY3Q96HD9 319 aa10.46□□□□□ -0.74
NEK3-210ENST00000620675 LYRM2Q9NU23 88 aaPredicted RBP10.46□□□□□ -0.74
NEK3-210ENST00000620675 IGHV3OR16-8A0A075B7F1 116 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 LINC01619G3V211 115 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 GIPP09681 153 aaPredicted RBP10.45□□□□□ -0.74
NEK3-210ENST00000620675 EDN2P20800 178 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 MFAP4P55083 255 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 GAMTQ14353 236 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 ACOT7LQ6ZUV0 252 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 LINC00482Q8N8I6 264 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 OR4F17Q8NGA8 305 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 NPIPB3Q92617 1050 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 OR4F4Q96R69 305 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 RANGRFQ9HD47 186 aaPredicted RBP10.45□□□□□ -0.74
NEK3-210ENST00000620675 IGKV1OR2-108A0A075B7D4 117 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 CORTO00230 105 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 TGOLN2O43493 480 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 PF4P02776 101 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 RAB11AP62491 216 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 TMEM252Q8N6L7 170 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 TMEM217Q8N7C4 229 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 DCUN1D4Q92564 292 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 DPF1Q92782 380 aa10.45□□□□□ -0.74
NEK3-210ENST00000620675 NHLH2Q02577 135 aa10.44□□□□□ -0.74
NEK3-210ENST00000620675 CD300CQ08708 224 aa10.44□□□□□ -0.74
NEK3-210ENST00000620675 OR2T35Q8NGX2 323 aa10.44□□□□□ -0.74
NEK3-210ENST00000620675 E5RGE8 158 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 GNG7O60262 68 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 IGKV1-17P01599 117 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 PVALBP20472 110 aaPredicted RBP10.43□□□□□ -0.74
NEK3-210ENST00000620675 MYCNOSP40205 109 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 SYNJ2BPP57105 145 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 RPP30P78346 268 aaKnown RBP10.43□□□□□ -0.74
NEK3-210ENST00000620675 TIGITQ495A1 244 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 UNQ9165/PRO28630Q6UXU0 137 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 OR4X1Q8NH49 305 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 IGKV1D-37A0A075B6S9 117 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 CLN5O75503 358 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 RLN2P04090 185 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 FCGR2BP31994 310 aaPredicted RBP10.43□□□□□ -0.74
NEK3-210ENST00000620675 ATP5IP56385 69 aaPredicted RBP10.43□□□□□ -0.74
NEK3-210ENST00000620675 RAP2BP61225 183 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 NOXA1Q86UR1 476 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 TMEM116Q8NCL8 245 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 SELENOKQ9Y6D0 94 aa10.43□□□□□ -0.74
NEK3-210ENST00000620675 IGLC1P0CG04 106 aa10.42□□□□□ -0.74
NEK3-210ENST00000620675 LYL1P12980 280 aa10.42□□□□□ -0.74
NEK3-210ENST00000620675 KLF5Q13887 457 aaPredicted RBP10.42□□□□□ -0.74
NEK3-210ENST00000620675 RPEL1Q2QD12 228 aa10.42□□□□□ -0.74
NEK3-210ENST00000620675 RCC1LQ96I51 464 aaKnown RBP10.42□□□□□ -0.74
NEK3-210ENST00000620675 ST6GAL2Q96JF0 529 aa10.42□□□□□ -0.74
NEK3-210ENST00000620675 RPS10-NUDT3A0A1W2PQS6 291 aa10.42□□□□□ -0.74
NEK3-210ENST00000620675 GGCTO75223 188 aaKnown RBP10.42□□□□□ -0.74
NEK3-210ENST00000620675 LY86O95711 162 aa10.42□□□□□ -0.74
NEK3-210ENST00000620675 GPX4P36969 197 aaPredicted RBP10.42□□□□□ -0.74
NEK3-210ENST00000620675 P2RY1P47900 373 aa10.42□□□□□ -0.74
NEK3-210ENST00000620675 NPBWR1P48145 328 aa10.42□□□□□ -0.74
NEK3-210ENST00000620675 EWSR1Q01844 656 aaKnown RBP eCLIP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 1177.3 ms