RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 KIR2DS1A0A191URI9 304 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 SH2D7A6NKC9 451 aaPredicted RBP8.53□□□□□ -1.04
VPS11-207ENST00000620429 B5MCH6 92 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 SMIM13P0DJ93 91 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 KIR2DS4P43632 304 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 KLRD1Q13241 179 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 KIR2DS1Q14954 304 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 PCOLCEQ15113 449 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 GDF5OSQ5U4N7 250 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 GTSF1Q8WW33 167 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 HS3ST6Q96QI5 342 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 ANAPC13Q9BS18 74 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 CDIP1Q9H305 208 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 YAE1D1Q9NRH1 226 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 TMEM140Q9NV12 185 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 MTCH1Q9NZJ7 389 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 WDR83OSQ9Y284 106 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 A0A0J9YW62 118 aa8.52□□□□□ -1.04
VPS11-207ENST00000620429 A0A1W2PRD5 423 aa8.52□□□□□ -1.04
VPS11-207ENST00000620429 A0A1W2PRF3 423 aa8.52□□□□□ -1.04
VPS11-207ENST00000620429 A0A1W2PRM7 423 aa8.52□□□□□ -1.04
VPS11-207ENST00000620429 NKX2-8O15522 239 aa8.52□□□□□ -1.04
VPS11-207ENST00000620429 SNAI2O43623 268 aa8.52□□□□□ -1.04
VPS11-207ENST00000620429 IBA57Q5T440 356 aaKnown RBP8.52□□□□□ -1.04
VPS11-207ENST00000620429 ZNF562Q6V9R5 426 aa8.52□□□□□ -1.04
VPS11-207ENST00000620429 IL36RNQ9UBH0 155 aa8.52□□□□□ -1.04
VPS11-207ENST00000620429 A0A1W2PRE2 83 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 A1L4Q6 167 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 KIR2DL2P43627 348 aaPredicted RBP8.52□□□□□ -1.05
VPS11-207ENST00000620429 CR1LQ2VPA4 569 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 TIGITQ495A1 244 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 FGFBP3Q8TAT2 258 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 ZNF502Q8TBZ5 544 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 SRXN1Q9BYN0 137 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 MSRB2Q9Y3D2 182 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 ATP23Q9Y6H3 246 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 CEP250Q9BV73 2442 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 FBLL1A6NHQ2 334 aaKnown RBP8.52□□□□□ -1.05
VPS11-207ENST00000620429 DKK1O94907 266 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 CER1O95813 267 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 GCHFRP30047 84 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 ETDBQ3ZM63 59 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 ACP7Q6ZNF0 438 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 PQLC2Q6ZP29 291 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 SSX8Q7RTT4 187 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 PKIBQ9C010 78 aa8.52□□□□□ -1.05
VPS11-207ENST00000620429 EP300Q09472 2414 aaPredicted RBP8.51□□□□□ -1.05
VPS11-207ENST00000620429 LOC102723996A0A087X1L8 192 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A10PA6NDY2 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A18PA6NE21 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A16PA6NEW6 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A20PA6NIJ5 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A8PA6NJQ4 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A7PA6NKC0 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A22PA8MWA6 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A12PA8MX19 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A5PA8MXJ8 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A23PA8MXZ1 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 MPDU1O75352 247 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A15PP0C7V4 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A13PP0C7W8 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A14PP0C7W9 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FAM90A24PP0C7X0 464 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 CT45A6P0DMU7 189 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 CT45A5P0DMU8 189 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 CT45A7P0DMV0 189 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 NTF4P34130 210 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 PDLIM3Q53GG5 364 aaPredicted RBP8.51□□□□□ -1.05
VPS11-207ENST00000620429 CT45A1Q5HYN5 189 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 WIPI1Q5MNZ9 446 aaPredicted RBP8.51□□□□□ -1.05
VPS11-207ENST00000620429 PCSK4Q6UW60 755 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 NHLRC2Q8NBF2 726 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 CT45A3Q8NHU0 189 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 OR2H1Q9GZK4 316 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 DKK4Q9UBT3 224 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 SMAD7O15105 426 aaKnown RBP8.51□□□□□ -1.05
VPS11-207ENST00000620429 ZIC3O60481 467 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 P04436 131 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 CCL3P10147 92 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 OPRK1P41145 380 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 FGF12P61328 243 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 TM2D2Q9BX73 214 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 B4GALT7Q9UBV7 327 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 RALYQ9UKM9 306 aaKnown RBP8.51□□□□□ -1.05
VPS11-207ENST00000620429 LOXL2Q9Y4K0 774 aa8.51□□□□□ -1.05
VPS11-207ENST00000620429 CACNA1BQ00975 2339 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 IGHV1-45A0A0A0MS14 117 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 NTN3O00634 580 aaPredicted RBP8.5□□□□□ -1.05
VPS11-207ENST00000620429 ZNHIT1O43257 154 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 IGLV2-8P01709 118 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 LIFP15018 202 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 GPR12P47775 334 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 MFAP2P55001 183 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 DSCR4P56555 118 aaPredicted RBP8.5□□□□□ -1.05
VPS11-207ENST00000620429 GUSBP1Q15486 140 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 Q6ZUT4 128 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 AAED1Q7RTV5 226 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 SH2D6Q7Z4S9 175 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 PIP4P1Q86T03 277 aa8.5□□□□□ -1.05
VPS11-207ENST00000620429 IL1F10Q8WWZ1 152 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms