RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 IGKV3D-20A0A0C4DH25 116 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 FABP5P3A8MUU1 101 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 ZNF708P17019 499 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 MESP2Q0VG99 397 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 MRPL20Q9BYC9 149 aaKnown RBP9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 GDF15Q99988 308 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 MED12LQ86YW9 2145 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 TMEM14DPA8MWL7 114 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 NSUN5P1Q3KNT7 163 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 TMEM95Q3KNT9 176 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 SPRED2Q7Z698 418 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 EPOPA6NHQ4 379 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 GCM2O75603 506 aaPredicted RBP9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 CD5P06127 495 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 RCC1LQ96I51 464 aaKnown RBP9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 SEPSECSQ9HD40 501 aaKnown RBP9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 APOMO95445 188 aa9.39□□□□□ -0.91
CCDC144B-208ENST00000618081 SRSF1Q07955 248 aaKnown RBP eCLIP9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 FAM89BQ8N5H3 189 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 TBL2Q9Y4P3 447 aaKnown RBP9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 PLXNB1O43157 2135 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 C12orf77C9JDV5 145 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 SLC25A2Q9BXI2 301 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 A0A1B0GV72 72 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 ZNF98A6NK75 572 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 S100A7L2Q5SY68 101 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 SLC25A15Q9Y619 301 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 THBDP07204 575 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 H2BFSP57053 126 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 IGLV3-21P80748 117 aaPredicted RBP9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 PAX2Q02962 417 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 WNK1Q9H4A3 2382 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 ADARB2-AS1A8MUL3 147 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 PSCAO43653 123 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 IGHV3-11P01762 117 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 WNT2P09544 360 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 SLC25A38Q96DW6 304 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 TMEM133Q9H2Q1 129 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 IGKV1D-42A0A075B6H8 117 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 YPEL1O60688 119 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 CD200R1LQ6Q8B3 271 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 YPEL2Q96QA6 119 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 SCO2A0A1W2PP80 73 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 GLMPQ8WWB7 406 aa9.38□□□□□ -0.91
CCDC144B-208ENST00000618081 TNRC6AQ8NDV7 1962 aaKnown RBP9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 IZUMO1RA6ND01 250 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 TMEM190Q8WZ59 177 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 FOXA3P55318 350 aaPredicted RBP9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 ZNF415Q09FC8 603 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 SIGLEC15Q6ZMC9 328 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 PLXNA2O75051 1894 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 F2Z2F3 143 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 CD8AP01732 235 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 C21orf62-AS1Q17RA5 79 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 CYSLTR1Q9Y271 337 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 ADAMTS9Q9P2N4 1935 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 A0A0G2JK05 382 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 FAM216BQ8N7L0 139 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 FBLIM1Q8WUP2 373 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 REPIN1Q9BWE0 567 aaKnown RBP9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 SAA2-SAA4A0A096LPE2 208 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 PQLC2LA1A4F0 135 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 SAA2P0DJI9 122 aaPredicted RBP9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 ZP1P60852 638 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 TFF3Q07654 80 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 COQ2Q96H96 371 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 A0A1B0GWB2 263 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 UMODP07911 640 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 FHITP49789 147 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 PSG7Q13046 419 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 ORMDL2Q53FV1 153 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 PUSL1Q8N0Z8 303 aaKnown RBP9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 CST9LQ9H4G1 147 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 TDGF1P3P51864 188 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 RHOGP84095 191 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 WFIKKN1Q96NZ8 548 aa9.37□□□□□ -0.91
CCDC144B-208ENST00000618081 C15orf61A6NNL5 157 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 ZNF257Q9Y2Q1 563 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 CELA3AP09093 270 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 NAT1P18440 290 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 PAX8Q06710 450 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 GGTLC3B5MD39 225 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 RNF125Q96EQ8 232 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 NUP210Q8TEM1 1887 aaPredicted RBP9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 LINC01549A6NIU2 74 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 CDKN1AP38936 164 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 WDYHV1Q96HA8 205 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 TRAV12-3A0A0B4J271 114 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 C17orf98A8MV24 154 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 LINC00587B1AMM8 73 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 ZNF600Q6ZNG1 722 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 KIAA1671Q9BY89 1806 aa9.36□□□□□ -0.91
CCDC144B-208ENST00000618081 PRR32B1ATL7 298 aa9.35□□□□□ -0.91
CCDC144B-208ENST00000618081 E9PLN8 166 aa9.35□□□□□ -0.91
CCDC144B-208ENST00000618081 SPAG8Q99932 426 aaPredicted RBP9.35□□□□□ -0.91
CCDC144B-208ENST00000618081 VKORC1Q9BQB6 163 aa9.35□□□□□ -0.91
CCDC144B-208ENST00000618081 PPBPP02775 128 aa9.35□□□□□ -0.91
CCDC144B-208ENST00000618081 CD28P10747 220 aa9.35□□□□□ -0.91
CCDC144B-208ENST00000618081 LHX2P50458 406 aa9.35□□□□□ -0.91
CCDC144B-208ENST00000618081 EGR4Q05215 589 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms