RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 TMEM183AQ8IXX5 376 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 RNASE7Q9H1E1 156 aaKnown RBP11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 PITPNC1Q9UKF7 332 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 CBLN1P23435 193 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 APOBEC3AP31941 199 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 SRP14P37108 136 aaKnown RBP11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 MFAP2P55001 183 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 ERHP84090 104 aaKnown RBP11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 CENPWQ5EE01 88 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 KCNIP4Q6PIL6 250 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 TMEM256Q8N2U0 113 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 OR10G8Q8NGN5 311 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 SGK494Q96LW2 274 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 WASHC3Q9Y3C0 194 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 RPL15P61313 204 aaKnown RBP11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 PRR31Q5SQ13 230 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 TMEM167AQ8TBQ9 72 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 EAF1Q96JC9 268 aaPredicted RBP11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 TRAPPC1Q9Y5R8 145 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 CACNA1BQ00975 2339 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 H3BTX0 84 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 DLL1O00548 723 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 USF1P22415 310 aaPredicted RBP11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 CD24P25063 80 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 TCL1AP56279 114 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 PATE2Q6UY27 113 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 MUC15Q8N387 334 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 MISP3Q96FF7 219 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 SLC25A2Q9BXI2 301 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 TMEM133Q9H2Q1 129 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 FKBP11Q9NYL4 201 aa11.33□□□□□ -0.6
PCDHGA3-202ENST00000612467 IGKV1D-37A0A075B6S9 117 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 A0A1W2PRD5 423 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 A0A1W2PRF3 423 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 A0A1W2PRM7 423 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 PPOXP50336 477 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 TMEM186Q96B77 213 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 SLC35E1Q96K37 410 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 CCL21O00585 134 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 CA1P00915 261 aaPredicted RBP11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 CD33P20138 364 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 TNXAQ16473 311 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 LDLRAD2Q5SZI1 272 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 PDPNQ86YL7 162 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 OR5AU1Q8NGC0 362 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 FAM167A-AS1Q96KT0 104 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 VKORC1Q9BQB6 163 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 SLC25A33Q9BSK2 321 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 COL25A1Q9BXS0 654 aaPredicted RBP11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 TECRQ9NZ01 308 aaKnown RBP11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 HIVEP3Q5T1R4 2406 aa11.32□□□□□ -0.6
PCDHGA3-202ENST00000612467 IGHV2-26A0A0B4J1V2 119 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 TRAV34A0A0B4J273 112 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 PSMB11A5LHX3 300 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 VSTM5A8MXK1 200 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 OR5G3P0C626 314 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 ADMP35318 185 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 CASP6P55212 293 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 ERVFC1-1P60608 527 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 RBPJQ06330 500 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 NGBQ9NPG2 151 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 HELTA6NFD8 242 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 C22orf46C9J442 243 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 TGOLN2O43493 480 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 UBE2L3P68036 154 aaKnown RBP11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 FBLN7Q53RD9 439 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 ZNF841Q6ZN19 808 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 ZNF355PQ9NSJ1 428 aa11.31□□□□□ -0.6
PCDHGA3-202ENST00000612467 FCN1O00602 326 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 TYMSP04818 313 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 ORM2P19652 201 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 LEMD1Q68G75 181 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 ITPR1Q14643 2758 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 CELSR1Q9NYQ6 3014 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 MAP1AP78559 2803 aaPredicted RBP11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 F2Z2F3 143 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 MT-CO2P00403 227 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 MGST1P10620 155 aaKnown RBP11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 OR8I2Q8N0Y5 310 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 C11orf52Q96A22 123 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 FBXL15Q9H469 300 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 KAAG1Q9UBP8 84 aa11.3□□□□□ -0.6
PCDHGA3-202ENST00000612467 IGLC7A0M8Q6 106 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 B9A039 149 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 C8orf88P0DMB2 117 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 GNG4P50150 75 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 CNN1P51911 297 aaKnown RBP11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 GNG5P63218 68 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 COX7A2P2O60397 106 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 HIST1H1BP16401 226 aaKnown RBP11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 LINC00311Q8N616 119 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 DNAJC4Q9NNZ3 241 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 ONECUT1Q9UBC0 465 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 FNDC10F2Z333 226 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 GZMBP10144 247 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 CD99P14209 185 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 IER3P46695 156 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 FOXL1Q12952 345 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 VMA21Q3ZAQ7 101 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms