RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 A0A0G2JNJ9 132 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 BRS3P32247 399 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 FAM162BQ5T6X4 162 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 RNASEH2CQ8TDP1 164 aaKnown RBP5.22□□□□□ -1.57
SNX13-213ENST00000611725 DPM3Q9P2X0 92 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 Q9UFV3 132 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 RNF24Q9Y225 148 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 HILPDAQ9Y5L2 63 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 TEX50A0A1B0GTY4 177 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 P01737 135 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 BRWD1-AS2P59051 145 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 POU2AF1Q16633 256 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 KIAA1644Q3SXP7 199 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 FAM122AQ96E09 287 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 C5orf30Q96GV9 206 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 SGK494Q96LW2 274 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 C1RLQ9NZP8 487 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 DOCK11Q5JSL3 2073 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 TMEM178BH3BS89 294 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 LIPFP07098 398 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 NBEAP1P0C6P0 100 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 PAFAH1B2P68402 229 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 FOXL1Q12952 345 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 JOSD1Q15040 202 aaPredicted RBP5.22□□□□□ -1.57
SNX13-213ENST00000611725 TMEM177Q53S58 311 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 ARSJQ5FYB0 599 aaPredicted RBP5.22□□□□□ -1.57
SNX13-213ENST00000611725 BPIFA4PQ86YQ2 179 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 C5orf17Q8NAS9 161 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 SRSF12Q8WXF0 261 aaKnown RBP5.22□□□□□ -1.57
SNX13-213ENST00000611725 A8MWL6 223 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 TYMSP04818 313 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 P0C879 139 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 GUSBP1Q15486 140 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 VAMP8Q9BV40 100 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 MRPL18Q9H0U6 180 aaKnown RBP5.22□□□□□ -1.57
SNX13-213ENST00000611725 PRDM13Q9H4Q3 707 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 AAMDCQ9H7C9 122 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 HIGD1AQ9Y241 93 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 K7EM74 188 aa5.21□□□□□ -1.57
SNX13-213ENST00000611725 NHLRC2Q8NBF2 726 aa5.21□□□□□ -1.57
SNX13-213ENST00000611725 OR2D3Q8NGH3 330 aa5.21□□□□□ -1.57
SNX13-213ENST00000611725 TBX15Q96SF7 602 aa5.21□□□□□ -1.57
SNX13-213ENST00000611725 HSPB9Q9BQS6 159 aa5.21□□□□□ -1.57
SNX13-213ENST00000611725 TMUB1Q9BVT8 246 aa5.21□□□□□ -1.57
SNX13-213ENST00000611725 EML5Q05BV3 1969 aa5.21□□□□□ -1.57
SNX13-213ENST00000611725 HSBP1L1C9JCN9 74 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 TMPRSS3P57727 454 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 TAS2R60P59551 318 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 C17orf58Q2M2W7 97 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 Q56UQ5 140 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 IGF2-ASQ6U949 168 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 PPP1R27Q86WC6 154 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 ZNRD1Q9P1U0 126 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 HEATR1Q9H583 2144 aaKnown RBP5.21□□□□□ -1.58
SNX13-213ENST00000611725 TMEM200BQ69YZ2 307 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 YPEL4Q96NS1 127 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 IL36BQ9NZH7 164 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 ZGRF1Q86YA3 2104 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 AMBPP02760 352 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 PYYP10082 97 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 RNASE2P10153 161 aaKnown RBP5.21□□□□□ -1.58
SNX13-213ENST00000611725 MLANAQ16655 118 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 TMEM14BQ9NUH8 114 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 C9JCJ5 164 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 NDUFS6O75380 124 aaKnown RBP5.21□□□□□ -1.58
SNX13-213ENST00000611725 IGHV1-8P0DP01 117 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 PRSS8Q16651 343 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 RNASEKQ6P5S7 137 aaKnown RBP5.21□□□□□ -1.58
SNX13-213ENST00000611725 KLHDC1Q8N7A1 406 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 OR5AN1Q8NGI8 311 aa5.21□□□□□ -1.58
SNX13-213ENST00000611725 KIAA1549LQ6ZVL6 1849 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 H0YJW9 148 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 SRIP30626 198 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 OR5I1Q13606 314 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 TMEM183BQ1AE95 376 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 LINC00305Q7Z4B0 112 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 TNFRSF14Q92956 283 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 KIF26AQ9ULI4 1882 aaPredicted RBP5.2□□□□□ -1.58
SNX13-213ENST00000611725 TRAV9-1A0A075B6T8 112 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 CGB3P0DN86 165 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 CGB7P0DN87 165 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 GPR82Q96P67 336 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 NDUFAF3Q9BU61 184 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 ABCA12Q86UK0 2595 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 PMS2P5A8MQ11 134 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 VWC2Q2TAL6 325 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 TMEM155Q4W5P6 130 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 OR4A5Q8NH83 315 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 OSTCQ9NRP0 149 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 ZNF462Q96JM2 2506 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 PRR20EP86478 221 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 PRR20CP86479 221 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 PRR20DP86480 221 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 PRR20BP86481 221 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 PRR20AP86496 221 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 PRB3Q04118 309 aaPredicted RBP5.2□□□□□ -1.58
SNX13-213ENST00000611725 TMEM249Q2WGJ8 235 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 NAV3Q8IVL0 2385 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 TRAV34A0A0B4J273 112 aa5.2□□□□□ -1.58
SNX13-213ENST00000611725 AREGP15514 252 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms