RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	ZNF257	Q9Y2Q1	563 aa		11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	TRBV9	A0A0B4J1U6	114 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	MT-CO2	P00403	227 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	TEPP	Q6URK8	271 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	C11orf52	Q96A22	123 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	TMEM68	Q96MH6	324 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	ZNF714	Q96N38	554 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	TBX15	Q96SF7	602 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	RALY	Q9UKM9	306 aa	Known RBP	11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614		C9JCJ5	164 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	ARL14EPL	P0DKL9	152 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	MYOD1	P15172	320 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	RPL19	P84098	196 aa	Known RBP	11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	PRCD	Q00LT1	54 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	TEX43	Q6ZNM6	134 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	ZNF833P	Q6ZTB9	187 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	ZNF114	Q8NC26	417 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	OR8B3	Q8NGG8	313 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	OR8B2	Q96RD0	313 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	DERL1	Q9BUN8	251 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	HINT2	Q9BX68	163 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	CTSZ	Q9UBR2	303 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	ARL2-SNX15	V9GYD0	113 aa		11.25	□□□□□ -0.61
COPS7B-223	ENST00000611614	FNDC10	F2Z333	226 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614		J3QR06	171 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	EFNA4	P52798	201 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	RAB31	Q13636	194 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	SSMEM1	Q8WWF3	244 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	PLEKHA3	Q9HB20	300 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	ZNRD1	Q9P1U0	126 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	SRRM4	A7MD48	611 aa	Known RBP	11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	IGKV1-16	P04430	117 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	COX6B1	P14854	86 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	ZNF90	Q03938	601 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	TMEM155	Q4W5P6	130 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	UHRF2	Q96PU4	802 aa		11.24	□□□□□ -0.61
COPS7B-223	ENST00000611614	RPL29	P47914	159 aa	Known RBP	11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	TMEM200B	Q69YZ2	307 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	STPG3	Q8N7X2	389 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	MIEN1	Q9BRT3	115 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	BET1L	Q9NYM9	111 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	USP9X	Q93008	2570 aa	Predicted RBP	11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	TRBV20OR9-2	A0A075B6H5	130 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	TEX50	A0A1B0GTY4	177 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	SCO2	A0A1W2PP80	73 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	RPLP1	P05386	114 aa	Known RBP	11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	CRISP2	P16562	243 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	GPR6	P46095	362 aa	Predicted RBP	11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	ATP5I	P56385	69 aa	Predicted RBP	11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614		Q0VG73	95 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	TMEM183B	Q1AE95	376 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	COX19	Q49B96	90 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	OCC1	Q8TAD7	63 aa		11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.23	□□□□□ -0.61
COPS7B-223	ENST00000611614	NUPR1	O60356	82 aa		11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	FCN3	O75636	299 aa		11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	APOA2	P02652	100 aa		11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	AREG	P15514	252 aa		11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	CCL3L1	P16619	93 aa		11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	GCHFR	P30047	84 aa		11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	RHOB	P62745	196 aa		11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	OSR1	Q8TAX0	266 aa	Predicted RBP	11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	CCL19	Q99731	98 aa		11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	MRPL20	Q9BYC9	149 aa	Known RBP	11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	MRPL18	Q9H0U6	180 aa	Known RBP	11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	FLNC	Q14315	2725 aa		11.22	□□□□□ -0.61
COPS7B-223	ENST00000611614	SAA1	P0DJI8	122 aa	Predicted RBP	11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	GAGE1	Q13065	139 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	TOMM20L	Q6UXN7	152 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	ATG101	Q9BSB4	218 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	YLPM1	P49750	1951 aa	Known RBP	11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614		A1L4Q6	167 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	LGALS4	P56470	323 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	PRR20E	P86478	221 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	PRR20C	P86479	221 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	PRR20D	P86480	221 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	PRR20B	P86481	221 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	PRR20A	P86496	221 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	C2orf83	Q53S99	150 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	TPTE2P1	Q5T6R2	138 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614		Q6ZWC4	215 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	OR5B3	Q8NH48	314 aa		11.21	□□□□□ -0.61
COPS7B-223	ENST00000611614	PGPEP1L	A6NFU8	196 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	MT-ND6	P03923	174 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	RPEL1	Q2QD12	228 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	OR5AU1	Q8NGC0	362 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	OR1L6	Q8NGR2	347 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	TP53TG3	Q9ULZ0	132 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	FAM208B	Q5VWN6	2430 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614		A0A1B0GUS0	222 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614		H0YJW9	148 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	NDUFS7	O75251	213 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	OR10J4	P0C629	311 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	TMEM177	Q53S58	311 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	SPATA31B1P	Q5VZV4	182 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	WDR73	Q6P4I2	378 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	OR5AN1	Q8NGI8	311 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	GNB1L	Q9BYB4	327 aa		11.2	□□□□□ -0.62
COPS7B-223	ENST00000611614	SEPSECS	Q9HD40	501 aa	Known RBP	11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms