RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 AKAIN1P0CW23 69 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 RNASE2P10153 161 aaKnown RBP12.86□□□□□ -0.35
PRKN-208ENST00000610470 PAFAH1B2P68402 229 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 DHODHQ02127 395 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 FAAP20Q6NZ36 180 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 RTBDNQ9BSG5 229 aaPredicted RBP12.86□□□□□ -0.35
PRKN-208ENST00000610470 NAA60Q9H7X0 242 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 IGHV3OR16-13A0A075B7E8 117 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 IGHV3-74A0A0B4J1X5 117 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 A0A0G2JRQ6 117 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 ZNF701M0R085 212 aaPredicted RBP12.85□□□□□ -0.35
PRKN-208ENST00000610470 TMEM50AO95807 157 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 RPL35AP18077 110 aaKnown RBP12.85□□□□□ -0.35
PRKN-208ENST00000610470 TNFSF8P32971 234 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 OPRK1P41145 380 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 TFPI2P48307 235 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 SPCS3P61009 180 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 DEFB135Q30KP9 77 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 FAM90A2PQ658T7 463 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 OR52E5Q8NH55 327 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 RBPMSQ93062 196 aaKnown RBP12.85□□□□□ -0.35
PRKN-208ENST00000610470 PRRT1Q99946 306 aa12.85□□□□□ -0.35
PRKN-208ENST00000610470 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.85□□□□□ -0.35
PRKN-208ENST00000610470 PUS1Q9Y606 427 aaKnown RBP eCLIP12.85□□□□□ -0.35
PRKN-208ENST00000610470 IGKV3-7A0A075B6H7 116 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 TNFRSF9Q07011 255 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 AARDQ4LEZ3 155 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 TCF24Q7RTU0 167 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 APRG1Q8IVJ8 170 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 OR4C16Q8NGL9 310 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 RNF183Q96D59 192 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 TMEM231Q9H6L2 316 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 VSIRQ9H7M9 311 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 ZFAND3Q9H8U3 227 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 MAP6D1Q9H9H5 199 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 GPR132Q9UNW8 380 aa12.84□□□□□ -0.35
PRKN-208ENST00000610470 A0A0J9YWU9 116 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 CRYM-AS1A6NIL9 109 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 CLN5O75503 358 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 HTR2BP41595 481 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 BSXQ3C1V8 233 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 Q6ZRM9 215 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 LYG2Q86SG7 212 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 SELENOHQ8IZQ5 122 aaKnown RBP12.83□□□□□ -0.36
PRKN-208ENST00000610470 GBGT1Q8N5D6 347 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 OR4X1Q8NH49 305 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 LHFPL5Q8TAF8 219 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 ST8SIA2Q92186 375 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 HYDINQ4G0P3 5121 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 ALMS1Q8TCU4 4167 aa12.83□□□□□ -0.36
PRKN-208ENST00000610470 RPS10-NUDT3A0A1W2PQS6 291 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 FABP12A6NFH5 140 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 DNASE2O00115 360 aaPredicted RBP12.82□□□□□ -0.36
PRKN-208ENST00000610470 TMEM268Q5VZI3 342 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 OR51S1Q8NGJ8 323 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 SCGB3A2Q96PL1 93 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 FNDC4Q9H6D8 234 aaPredicted RBP12.82□□□□□ -0.36
PRKN-208ENST00000610470 CACNG5Q9UF02 275 aa12.82□□□□□ -0.36
PRKN-208ENST00000610470 TRAV30A0A087WSZ9 112 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 A0A1B0GU03 582 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 A0A1W2PS18 150 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 ANKRD20A5PA0PJZ0 165 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 GSTZ1O43708 216 aaPredicted RBP12.81□□□□□ -0.36
PRKN-208ENST00000610470 APOHP02749 345 aaPredicted RBP12.81□□□□□ -0.36
PRKN-208ENST00000610470 NPPCP23582 126 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 RPL11P62913 178 aaKnown RBP12.81□□□□□ -0.36
PRKN-208ENST00000610470 TMEM217Q8N7C4 229 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 GPR146Q96CH1 333 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 METTL26Q96S19 204 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 CSTL1Q9H114 145 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 MS4A6AQ9H2W1 248 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 HEYLQ9NQ87 328 aaPredicted RBP12.81□□□□□ -0.36
PRKN-208ENST00000610470 CACFD1Q9UGQ2 172 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 SCP2D1Q9UJQ7 156 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 KCNIP3Q9Y2W7 256 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 TMEM56-RWDD3S4R434 201 aa12.81□□□□□ -0.36
PRKN-208ENST00000610470 TRAV2A0A0B4J234 112 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 IGHV3-66A0A0C4DH42 116 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 CXorf65A6NEN9 183 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 MPTX1A8MV57 137 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 DFFBO76075 338 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 ATF4P18848 351 aaPredicted RBP12.8□□□□□ -0.36
PRKN-208ENST00000610470 ZNF124Q15973 351 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 MLANAQ16655 118 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 IL22RA2Q969J5 263 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 TMEM230Q96A57 120 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 NARS2Q96I59 477 aaKnown RBP12.8□□□□□ -0.36
PRKN-208ENST00000610470 SOSTQ9BQB4 213 aa12.8□□□□□ -0.36
PRKN-208ENST00000610470 MRPL36Q9P0J6 103 aaKnown RBP12.8□□□□□ -0.36
PRKN-208ENST00000610470 CEBPZOSA8MTT3 80 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 S100A5P33763 92 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 PMS2P11Q13670 270 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 C2orf83Q53S99 150 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 LILRB2Q8N423 598 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 SLC24A4Q8NFF2 622 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 RNASEH2CQ8TDP1 164 aaKnown RBP12.79□□□□□ -0.36
PRKN-208ENST00000610470 GATAD1Q8WUU5 269 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 NDUFA13Q9P0J0 144 aa12.79□□□□□ -0.36
PRKN-208ENST00000610470 NUPR2A6NF83 97 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms