RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 IGHV3-66A0A0C4DH42 116 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 A0A1B0GU03 582 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 TMEM50AO95807 157 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 OR5AC1P0C628 307 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 SUB1P53999 127 aaKnown RBP eCLIP11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 MEF2DQ14814 521 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 BSXQ3C1V8 233 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 AARDQ4LEZ3 155 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 Q6ZRM9 215 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 LILRB2Q8N423 598 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 LHFPL5Q8TAF8 219 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 SMIM4Q8WVI0 70 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 LINC00476Q8WZB0 136 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 RTBDNQ9BSG5 229 aaPredicted RBP11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 TMEM222Q9H0R3 208 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 ENY2Q9NPA8 101 aa11.07□□□□□ -0.64
SHKBP1-226ENST00000600791 NUPR2A6NF83 97 aa11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 CDS2O95674 445 aa11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 CD5P06127 495 aa11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 ATF4P18848 351 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 OPRK1P41145 380 aa11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 CMC4P56277 68 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 FAM219AQ8IW50 185 aa11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 GLYATL2Q8WU03 294 aa11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 CSTL1Q9H114 145 aa11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 NAA60Q9H7X0 242 aa11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 C14orf166Q9Y224 244 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-226ENST00000600791 MPTX1A8MV57 137 aa11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 DISC1C4P0D8 188 aa11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 CLN5O75503 358 aa11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 DFFBO76075 338 aa11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 RPL5P46777 297 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 SPCS3P61009 180 aa11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 SURF2Q15527 256 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 MLANAQ16655 118 aa11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 OR4C16Q8NGL9 310 aa11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 OR4X1Q8NH49 305 aa11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 RBPMSQ93062 196 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 MS4A6AQ9H2W1 248 aa11.05□□□□□ -0.64
SHKBP1-226ENST00000600791 TEX13DA0A0J9YY54 714 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 CTDSPLO15194 276 aa11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 AKAIN1P0CW23 69 aa11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 IL18Q14116 193 aa11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 CEMP1Q6PRD7 247 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 CLVS1Q8IUQ0 354 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 SELENOHQ8IZQ5 122 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 FAM24BQ8N5W8 94 aa11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 TMEM217Q8N7C4 229 aa11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 OR52E5Q8NH55 327 aa11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 DIRAS2Q96HU8 199 aa11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 CCDC59Q9P031 241 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 CACNG5Q9UF02 275 aa11.04□□□□□ -0.64
SHKBP1-226ENST00000600791 TRAV2A0A0B4J234 112 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 CRYM-AS1A6NIL9 109 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 DNASE2O00115 360 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 IGKV1-17P01599 117 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 HTR2BP41595 481 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 DEFB131AP59861 70 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 DHODHQ02127 395 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 TMEM268Q5VZI3 342 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 LEMD1Q68G75 181 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 DYNC2LI1Q8TCX1 351 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 RAB2BQ8WUD1 216 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 GATAD1Q8WUU5 269 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 GPR146Q96CH1 333 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 METTL26Q96S19 204 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 TMEM231Q9H6L2 316 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 GPR132Q9UNW8 380 aa11.03□□□□□ -0.64
SHKBP1-226ENST00000600791 A0A1W2PS18 150 aa11.02□□□□□ -0.65
SHKBP1-226ENST00000600791 SCGB2A1O75556 95 aa11.02□□□□□ -0.65
SHKBP1-226ENST00000600791 LY6G6CO95867 125 aa11.02□□□□□ -0.65
SHKBP1-226ENST00000600791 NPPCP23582 126 aa11.02□□□□□ -0.65
SHKBP1-226ENST00000600791 CRYBB3P26998 211 aa11.02□□□□□ -0.65
SHKBP1-226ENST00000600791 TIGITQ495A1 244 aa11.02□□□□□ -0.65
SHKBP1-226ENST00000600791 OR51S1Q8NGJ8 323 aa11.02□□□□□ -0.65
SHKBP1-226ENST00000600791 PRRT1Q99946 306 aa11.02□□□□□ -0.65
SHKBP1-226ENST00000600791 RARRES2Q99969 163 aa11.02□□□□□ -0.65
SHKBP1-226ENST00000600791 HEYLQ9NQ87 328 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-226ENST00000600791 RABAC1Q9UI14 185 aa11.02□□□□□ -0.65
SHKBP1-226ENST00000600791 RPS10-NUDT3A0A1W2PQS6 291 aa11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 ANKRD20A5PA0PJZ0 165 aa11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 CA1P00915 261 aaPredicted RBP11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 P2RY1P47900 373 aa11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 C2orf83Q53S99 150 aa11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 PRSS54Q6PEW0 395 aa11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 SLC24A4Q8NFF2 622 aa11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 TMEM230Q96A57 120 aa11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 PRR13Q9NZ81 148 aa11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 RABL2AQ9UBK7 228 aaPredicted RBP11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 RABL2BQ9UNT1 228 aa11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 TMEM56-RWDD3S4R434 201 aa11.01□□□□□ -0.65
SHKBP1-226ENST00000600791 TRAV30A0A087WSZ9 112 aa11□□□□□ -0.65
SHKBP1-226ENST00000600791 CEBPZOSA8MTT3 80 aa11□□□□□ -0.65
SHKBP1-226ENST00000600791 GSTZ1O43708 216 aaPredicted RBP11□□□□□ -0.65
SHKBP1-226ENST00000600791 NXPH3O95157 252 aa11□□□□□ -0.65
SHKBP1-226ENST00000600791 IGLC1P0CG04 106 aa11□□□□□ -0.65
SHKBP1-226ENST00000600791 RND2P52198 227 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms