RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.38□□□□□ -0.915e-7■■■□□ 15
ARHGEF1-220ENST00000600274 FAM208BQ5VWN6 2430 aa9.38□□□□□ -0.91
ARHGEF1-220ENST00000600274 SHISA9B4DS77 424 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 MOSP00540 346 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 GCHFRP30047 84 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 SSBP2P81877 361 aaPredicted RBP9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 CDSNQ15517 529 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 HSPB9Q9BQS6 159 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 FOXA2Q9Y261 457 aaPredicted RBP9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 TMEM250H0YL14 139 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 CXorf1O96002 111 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 ORM2P19652 201 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 IER3P46695 156 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 LY6DQ14210 128 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 SP5Q6BEB4 398 aaPredicted RBP9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 TEX38Q6PEX7 206 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 ATOH7Q8N100 152 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 Q8N7P7 452 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 NPIPB3Q92617 1050 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 SLC35E1Q96K37 410 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 CTDSP1Q9GZU7 261 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 H0YJW9 148 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 CRYBB3P26998 211 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 SUMO1P63165 101 aaKnown RBP9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 TEX36Q5VZQ5 186 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 CMTM2Q8TAZ6 248 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 NDUFAF3Q9BU61 184 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 ZNF430Q9H8G1 570 aaPredicted RBP9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 HILPDAQ9Y5L2 63 aa9.37□□□□□ -0.91
ARHGEF1-220ENST00000600274 MYO18BQ8IUG5 2567 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 IGKV1OR2-108A0A075B7D4 117 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 A8MWP6 167 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 FCN1O00602 326 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 LOXP28300 417 aaPredicted RBP9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 ARF6P62330 175 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 COTL1Q14019 142 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 CR1LQ2VPA4 569 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 TXN2Q99757 166 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 PARD6GQ9BYG4 376 aaPredicted RBP9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 GSX1Q9H4S2 264 aaPredicted RBP9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 MPDU1O75352 247 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 MT-CO2P00403 227 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 APOBEC3AP31941 199 aaPredicted RBP9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 PRCDQ00LT1 54 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 OR1L8Q8NGR8 309 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 OR52E5Q8NH55 327 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 BLNKQ8WV28 456 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 NAGKQ9UJ70 344 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 S4R3C0 116 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 DSCAML1Q8TD84 2053 aa9.36□□□□□ -0.91
ARHGEF1-220ENST00000600274 IL3RAP26951 378 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 ERVFC1-1P60608 527 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 HES1Q14469 280 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 FXYD3Q14802 87 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 VWC2Q2TAL6 325 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 CENPVQ7Z7K6 275 aaPredicted RBP9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 S100A7AQ86SG5 101 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 C1orf159Q96HA4 380 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 YPEL4Q96NS1 127 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 TRBV24-1A0A075B6N3 115 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 LINC00869P0C866 280 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 STAG3L2P0CL84 134 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 STAG3L3P0CL85 134 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 NUTF2P61970 127 aaKnown RBP9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 OR4C13Q8NGP0 309 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 DIRC2Q96SL1 478 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 VPS25Q9BRG1 176 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 SNHG12Q9BXW3 62 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 INSIG2Q9Y5U4 225 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 H0Y8G0 127 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 SIAH2O43255 324 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 CRISP2P16562 243 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 RND2P52198 227 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 PRR27Q6MZM9 219 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 LINC01551Q86U37 167 aa9.35□□□□□ -0.91
ARHGEF1-220ENST00000600274 TRBV20OR9-2A0A075B6H5 130 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 PDE6DO43924 150 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 NUPR1O60356 82 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 PFN1P07737 140 aaKnown RBP9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 PYYP10082 97 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 Q5PR19 223 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 OCC1Q8TAD7 63 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 PKD1L2Q7Z442 2459 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 COX7A2P2O60397 106 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 TMPRSS3P57727 454 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 UBE2L3P68036 154 aaKnown RBP9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 WT1-ASQ06250 92 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 TDRG1Q3Y452 100 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 MORN5Q5VZ52 161 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 PNKDQ8N490 385 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 KIR3DL3Q8N743 410 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 VKORC1Q9BQB6 163 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 VAMP8Q9BV40 100 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 FBXL15Q9H469 300 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 NAT8BQ9UHF3 227 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 SSUH2Q9Y2M2 353 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 WASHC3Q9Y3C0 194 aa9.34□□□□□ -0.91
ARHGEF1-220ENST00000600274 PRSS46E5RG02 174 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms