RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 Q6ZRM9 215 aa10.94□□□□□ -0.66
XRCC1-208ENST00000598422 TMED4Q7Z7H5 227 aa10.94□□□□□ -0.66
XRCC1-208ENST00000598422 TRIM63Q969Q1 353 aa10.94□□□□□ -0.66
XRCC1-208ENST00000598422 GPR146Q96CH1 333 aa10.94□□□□□ -0.66
XRCC1-208ENST00000598422 GALNT14Q96FL9 552 aa10.94□□□□□ -0.66
XRCC1-208ENST00000598422 FAM110AQ9BQ89 295 aa10.94□□□□□ -0.66
XRCC1-208ENST00000598422 RHPN1-AS1Q9BWJ2 59 aa10.94□□□□□ -0.66
XRCC1-208ENST00000598422 HIPK2Q9H2X6 1198 aa10.94□□□□□ -0.66
XRCC1-208ENST00000598422 SMPXQ9UHP9 88 aa10.94□□□□□ -0.66
XRCC1-208ENST00000598422 LOC102724200A0A096LPH7 203 aaPredicted RBP10.93□□□□□ -0.66
XRCC1-208ENST00000598422 TRAV14DV4A0A0A6YYC5 116 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 KLF9Q13886 244 aaPredicted RBP10.93□□□□□ -0.66
XRCC1-208ENST00000598422 TMEM187Q14656 261 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 AARDQ4LEZ3 155 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 SPANXN2Q5MJ10 180 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 ZNF600Q6ZNG1 722 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 LGI3Q8N145 548 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 SLC24A4Q8NFF2 622 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 TMEM230Q96A57 120 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 OR10C1Q96KK4 312 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 PRR13Q9NZ81 148 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 UBQLN2Q9UHD9 624 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 PUS1Q9Y606 427 aaKnown RBP eCLIP10.93□□□□□ -0.66
XRCC1-208ENST00000598422 V9GYH0 126 aa10.93□□□□□ -0.66
XRCC1-208ENST00000598422 ZNF701M0R085 212 aaPredicted RBP10.92□□□□□ -0.66
XRCC1-208ENST00000598422 CHEK1O14757 476 aa10.92□□□□□ -0.66
XRCC1-208ENST00000598422 NXPH3O95157 252 aa10.92□□□□□ -0.66
XRCC1-208ENST00000598422 CASC10Q5T4H9 136 aa10.92□□□□□ -0.66
XRCC1-208ENST00000598422 PVRIGQ6DKI7 326 aa10.92□□□□□ -0.66
XRCC1-208ENST00000598422 TOMM20LQ6UXN7 152 aa10.92□□□□□ -0.66
XRCC1-208ENST00000598422 RNF2Q99496 336 aa10.92□□□□□ -0.66
XRCC1-208ENST00000598422 RBM38Q9H0Z9 239 aaKnown RBP10.92□□□□□ -0.66
XRCC1-208ENST00000598422 EDA2RQ9HAV5 297 aa10.92□□□□□ -0.66
XRCC1-208ENST00000598422 IGKV3-7A0A075B6H7 116 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 IGHV3OR16-13A0A075B7E8 117 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 IGHV3-74A0A0B4J1X5 117 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 A0A0B4J2A0 478 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 CLN5O75503 358 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 VAMP1P23763 118 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 TFPI2P48307 235 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 INPP1P49441 399 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 CCR6P51684 374 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 SMCO1Q147U7 214 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 ZNF79Q15937 498 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 BSXQ3C1V8 233 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 ZFAND6Q6FIF0 208 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 NOXA1Q86UR1 476 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 OR4X1Q8NH49 305 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 DEDD2Q8WXF8 326 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 FNDC4Q9H6D8 234 aaPredicted RBP10.91□□□□□ -0.66
XRCC1-208ENST00000598422 TMEM231Q9H6L2 316 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 SHPKQ9UHJ6 478 aa10.91□□□□□ -0.66
XRCC1-208ENST00000598422 KMT2CQ8NEZ4 4911 aaKnown RBP10.9□□□□□ -0.66
XRCC1-208ENST00000598422 TMEM50AO95807 157 aa10.9□□□□□ -0.66
XRCC1-208ENST00000598422 CD5P06127 495 aa10.9□□□□□ -0.66
XRCC1-208ENST00000598422 NPY1RP25929 384 aa10.9□□□□□ -0.66
XRCC1-208ENST00000598422 APOC4P55056 127 aa10.9□□□□□ -0.66
XRCC1-208ENST00000598422 SUPT4H1P63272 117 aaKnown RBP10.9□□□□□ -0.66
XRCC1-208ENST00000598422 PAFAH1B2P68402 229 aa10.9□□□□□ -0.66
XRCC1-208ENST00000598422 CCDC190Q86UF4 302 aa10.9□□□□□ -0.66
XRCC1-208ENST00000598422 RNASEH2CQ8TDP1 164 aaKnown RBP10.9□□□□□ -0.66
XRCC1-208ENST00000598422 NARS2Q96I59 477 aaKnown RBP10.9□□□□□ -0.66
XRCC1-208ENST00000598422 ZNF414Q96IQ9 312 aa10.9□□□□□ -0.66
XRCC1-208ENST00000598422 METTL26Q96S19 204 aa10.9□□□□□ -0.66
XRCC1-208ENST00000598422 SLC25A21Q9BQT8 299 aaPredicted RBP10.9□□□□□ -0.66
XRCC1-208ENST00000598422 TRAV30A0A087WSZ9 112 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 IFNA10P01566 189 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 SLC25A4P12235 298 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 RND2P52198 227 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 RPL11P62913 178 aaKnown RBP10.89□□□□□ -0.67
XRCC1-208ENST00000598422 TNFRSF9Q07011 255 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 ODF3L2Q3SX64 289 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 C2orf83Q53S99 150 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 TMEM128Q5BJH2 165 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 NMSQ5H8A3 153 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 TRIQKQ629K1 86 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 ETFRF1Q6IPR1 90 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 TCF24Q7RTU0 167 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 LYZL2Q7Z4W2 148 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 OR1S1Q8NH92 325 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 ZFAND3Q9H8U3 227 aa10.89□□□□□ -0.67
XRCC1-208ENST00000598422 MRPL36Q9P0J6 103 aaKnown RBP10.89□□□□□ -0.67
XRCC1-208ENST00000598422 IGHV3-66A0A0C4DH42 116 aa10.88□□□□□ -0.67
XRCC1-208ENST00000598422 A0A1B0GU03 582 aa10.88□□□□□ -0.67
XRCC1-208ENST00000598422 A0A1W2PS18 150 aa10.88□□□□□ -0.67
XRCC1-208ENST00000598422 DNASE2O00115 360 aaPredicted RBP10.88□□□□□ -0.67
XRCC1-208ENST00000598422 NPPCP23582 126 aa10.88□□□□□ -0.67
XRCC1-208ENST00000598422 CMC4P56277 68 aaPredicted RBP10.88□□□□□ -0.67
XRCC1-208ENST00000598422 MLANAQ16655 118 aa10.88□□□□□ -0.67
XRCC1-208ENST00000598422 GBGT1Q8N5D6 347 aa10.88□□□□□ -0.67
XRCC1-208ENST00000598422 OR1S2Q8NGQ3 325 aa10.88□□□□□ -0.67
XRCC1-208ENST00000598422 IL17DQ8TAD2 202 aa10.88□□□□□ -0.67
XRCC1-208ENST00000598422 DTD1Q8TEA8 209 aa10.88□□□□□ -0.67
XRCC1-208ENST00000598422 ST8SIA2Q92186 375 aa10.88□□□□□ -0.67
XRCC1-208ENST00000598422 DUXBA0A1W2PPF3 345 aa10.87□□□□□ -0.67
XRCC1-208ENST00000598422 TIGITQ495A1 244 aa10.87□□□□□ -0.67
XRCC1-208ENST00000598422 CENPSQ8N2Z9 138 aa10.87□□□□□ -0.67
XRCC1-208ENST00000598422 ACY3Q96HD9 319 aa10.87□□□□□ -0.67
XRCC1-208ENST00000598422 SRRQ9GZT4 340 aa10.87□□□□□ -0.67
XRCC1-208ENST00000598422 VSIRQ9H7M9 311 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms