RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CTSGP08311 255 aa19.62■□□□□ 0.73
TRIM28-204ENST00000594806 RPP30P78346 268 aaKnown RBP19.62■□□□□ 0.73
TRIM28-204ENST00000594806 ID3Q02535 119 aa19.62■□□□□ 0.73
TRIM28-204ENST00000594806 C12orf45Q8N5I9 185 aaPredicted RBP19.62■□□□□ 0.73
TRIM28-204ENST00000594806 SEC22CQ9BRL7 303 aa19.62■□□□□ 0.73
TRIM28-204ENST00000594806 GPN1Q9HCN4 374 aaPredicted RBP19.62■□□□□ 0.73
TRIM28-204ENST00000594806 ZC4H2Q9NQZ6 224 aa19.62■□□□□ 0.73
TRIM28-204ENST00000594806 UFC1Q9Y3C8 167 aa19.62■□□□□ 0.73
TRIM28-204ENST00000594806 ZNF320A2RRD8 509 aa19.61■□□□□ 0.73
TRIM28-204ENST00000594806 PRAF2O60831 178 aa19.61■□□□□ 0.73
TRIM28-204ENST00000594806 SLC25A4P12235 298 aa19.61■□□□□ 0.73
TRIM28-204ENST00000594806 ADMP35318 185 aa19.61■□□□□ 0.73
TRIM28-204ENST00000594806 OR4X1Q8NH49 305 aa19.61■□□□□ 0.73
TRIM28-204ENST00000594806 CHRDL1Q9BU40 450 aa19.61■□□□□ 0.73
TRIM28-204ENST00000594806 FNDC4Q9H6D8 234 aaPredicted RBP19.61■□□□□ 0.73
TRIM28-204ENST00000594806 ZNF256Q9Y2P7 627 aaPredicted RBP19.61■□□□□ 0.73
TRIM28-204ENST00000594806 C2orf70A6NJV1 201 aa19.6■□□□□ 0.73
TRIM28-204ENST00000594806 NKX2-1P43699 371 aaPredicted RBP19.6■□□□□ 0.73
TRIM28-204ENST00000594806 OR4D5Q8NGN0 318 aa19.6■□□□□ 0.73
TRIM28-204ENST00000594806 OR2K2Q8NGT1 345 aa19.6■□□□□ 0.73
TRIM28-204ENST00000594806 MARC2Q969Z3 335 aa19.6■□□□□ 0.73
TRIM28-204ENST00000594806 MEGF8Q7Z7M0 2845 aa19.6■□□□□ 0.73
TRIM28-204ENST00000594806 TRAV30A0A087WSZ9 112 aa19.59■□□□□ 0.73
TRIM28-204ENST00000594806 MPTX1A8MV57 137 aa19.59■□□□□ 0.73
TRIM28-204ENST00000594806 DCTN2Q13561 401 aaKnown RBP19.59■□□□□ 0.73
TRIM28-204ENST00000594806 IAH1Q2TAA2 248 aaPredicted RBP19.59■□□□□ 0.73
TRIM28-204ENST00000594806 TMEM170AQ8WVE7 144 aa19.59■□□□□ 0.73
TRIM28-204ENST00000594806 TMEM190Q8WZ59 177 aa19.59■□□□□ 0.73
TRIM28-204ENST00000594806 MARVELD1Q9BSK0 173 aa19.59■□□□□ 0.73
TRIM28-204ENST00000594806 TECRQ9NZ01 308 aaKnown RBP19.59■□□□□ 0.73
TRIM28-204ENST00000594806 INMT-MINDY4F8WBC2 141 aa19.58■□□□□ 0.72
TRIM28-204ENST00000594806 WRBO00258 174 aa19.58■□□□□ 0.72
TRIM28-204ENST00000594806 CLN5O75503 358 aa19.58■□□□□ 0.72
TRIM28-204ENST00000594806 TMEM50AO95807 157 aa19.58■□□□□ 0.72
TRIM28-204ENST00000594806 IGHV3-48P01763 117 aa19.58■□□□□ 0.72
TRIM28-204ENST00000594806 PRB2P02812 416 aaPredicted RBP19.58■□□□□ 0.72
TRIM28-204ENST00000594806 RAB11AP62491 216 aa19.58■□□□□ 0.72
TRIM28-204ENST00000594806 SNRPGP15A8MWD9 76 aa19.57■□□□□ 0.72
TRIM28-204ENST00000594806 K7EMT4 169 aa19.57■□□□□ 0.72
TRIM28-204ENST00000594806 IFNA4P05014 189 aa19.57■□□□□ 0.72
TRIM28-204ENST00000594806 FOLR2P14207 255 aa19.57■□□□□ 0.72
TRIM28-204ENST00000594806 CBLN1P23435 193 aa19.57■□□□□ 0.72
TRIM28-204ENST00000594806 UNQ9165/PRO28630Q6UXU0 137 aa19.57■□□□□ 0.72
TRIM28-204ENST00000594806 ZBTB8BQ8NAP8 495 aaPredicted RBP19.57■□□□□ 0.72
TRIM28-204ENST00000594806 UXS1Q8NBZ7 420 aa19.57■□□□□ 0.72
TRIM28-204ENST00000594806 TMEM116Q8NCL8 245 aa19.57■□□□□ 0.72
TRIM28-204ENST00000594806 OR10C1Q96KK4 312 aa19.57■□□□□ 0.72
TRIM28-204ENST00000594806 IGHV3-35A0A0C4DH35 117 aa19.56■□□□□ 0.72
TRIM28-204ENST00000594806 TMEM213A2RRL7 107 aa19.56■□□□□ 0.72
TRIM28-204ENST00000594806 IAPPP10997 89 aa19.56■□□□□ 0.72
TRIM28-204ENST00000594806 GPX4P36969 197 aaPredicted RBP19.56■□□□□ 0.72
TRIM28-204ENST00000594806 CD69Q07108 199 aa19.56■□□□□ 0.72
TRIM28-204ENST00000594806 LCN12Q6JVE5 192 aa19.56■□□□□ 0.72
TRIM28-204ENST00000594806 CACNG8Q8WXS5 425 aa19.56■□□□□ 0.72
TRIM28-204ENST00000594806 MAGT1Q9H0U3 335 aa19.56■□□□□ 0.72
TRIM28-204ENST00000594806 DAZ1Q9NQZ3 744 aaKnown RBP19.56■□□□□ 0.72
TRIM28-204ENST00000594806 MRPL27Q9P0M9 148 aaKnown RBP19.56■□□□□ 0.72
TRIM28-204ENST00000594806 C15orf62A8K5M9 175 aa19.55■□□□□ 0.72
TRIM28-204ENST00000594806 C8orf88P0DMB2 117 aa19.55■□□□□ 0.72
TRIM28-204ENST00000594806 SPNP16150 400 aa19.55■□□□□ 0.72
TRIM28-204ENST00000594806 MLANAQ16655 118 aa19.55■□□□□ 0.72
TRIM28-204ENST00000594806 C11orf87Q6NUJ2 197 aa19.55■□□□□ 0.72
TRIM28-204ENST00000594806 PRSS54Q6PEW0 395 aa19.55■□□□□ 0.72
TRIM28-204ENST00000594806 MRAPQ8TCY5 172 aa19.55■□□□□ 0.72
TRIM28-204ENST00000594806 DYNLRB2Q8TF09 96 aa19.55■□□□□ 0.72
TRIM28-204ENST00000594806 DNAH3Q8TD57 4116 aa19.54■□□□□ 0.72
TRIM28-204ENST00000594806 WI2-2373I1.2A0A1W2PRP0 233 aa19.54■□□□□ 0.72
TRIM28-204ENST00000594806 ADAMTSL5Q6ZMM2 481 aa19.54■□□□□ 0.72
TRIM28-204ENST00000594806 ZNF600Q6ZNG1 722 aa19.54■□□□□ 0.72
TRIM28-204ENST00000594806 GSKIPQ9P0R6 139 aa19.54■□□□□ 0.72
TRIM28-204ENST00000594806 C5orf51A6NDU8 294 aa19.53■□□□□ 0.72
TRIM28-204ENST00000594806 K7EIL1 84 aa19.53■□□□□ 0.72
TRIM28-204ENST00000594806 GP9P14770 177 aa19.53■□□□□ 0.72
TRIM28-204ENST00000594806 POLR2GP62487 172 aaKnown RBP eCLIP19.53■□□□□ 0.72
TRIM28-204ENST00000594806 TM4SF20Q53R12 229 aa19.53■□□□□ 0.72
TRIM28-204ENST00000594806 SLC16A13Q7RTY0 426 aa19.53■□□□□ 0.72
TRIM28-204ENST00000594806 OR1S2Q8NGQ3 325 aa19.53■□□□□ 0.72
TRIM28-204ENST00000594806 SMIM8Q96KF7 97 aa19.53■□□□□ 0.72
TRIM28-204ENST00000594806 C2orf50Q96LR7 162 aa19.53■□□□□ 0.72
TRIM28-204ENST00000594806 RAB40CQ96S21 281 aa19.53■□□□□ 0.72
TRIM28-204ENST00000594806 STRAPQ9Y3F4 350 aaKnown RBP19.53■□□□□ 0.72
TRIM28-204ENST00000594806 PTTG1O95997 202 aa19.52■□□□□ 0.72
TRIM28-204ENST00000594806 RND2P52198 227 aa19.52■□□□□ 0.72
TRIM28-204ENST00000594806 TAS2R30P59541 319 aa19.52■□□□□ 0.72
TRIM28-204ENST00000594806 DEFB114Q30KQ6 69 aa19.52■□□□□ 0.72
TRIM28-204ENST00000594806 GSG1LQ6UXU4 331 aa19.52■□□□□ 0.72
TRIM28-204ENST00000594806 C20orf24Q9BUV8 137 aa19.52■□□□□ 0.72
TRIM28-204ENST00000594806 MRPL36Q9P0J6 103 aaKnown RBP19.52■□□□□ 0.72
TRIM28-204ENST00000594806 FAM25EA8MYX2 175 aa19.51■□□□□ 0.71
TRIM28-204ENST00000594806 CCSO14618 274 aa19.51■□□□□ 0.71
TRIM28-204ENST00000594806 SPANXN5Q5MJ07 72 aa19.51■□□□□ 0.71
TRIM28-204ENST00000594806 PRR25Q96S07 402 aa19.51■□□□□ 0.71
TRIM28-204ENST00000594806 GINS3Q9BRX5 216 aa19.51■□□□□ 0.71
TRIM28-204ENST00000594806 PSENENQ9NZ42 101 aa19.51■□□□□ 0.71
TRIM28-204ENST00000594806 YIF1AO95070 293 aa19.5■□□□□ 0.71
TRIM28-204ENST00000594806 SCGB1D2O95969 90 aa19.5■□□□□ 0.71
TRIM28-204ENST00000594806 HAPLN4Q86UW8 402 aa19.5■□□□□ 0.71
TRIM28-204ENST00000594806 ZNF414Q96IQ9 312 aa19.5■□□□□ 0.71
TRIM28-204ENST00000594806 SLC35E1Q96K37 410 aa19.5■□□□□ 0.71
TRIM28-204ENST00000594806 PAIP2BQ9ULR5 123 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms