RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 C17orf100A8MU93 164 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 BMPR1BO00238 502 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 MYCNOSP40205 109 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 FAM27E3Q08E93 113 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 SIGLECL1Q8N7X8 197 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 TMEM186Q96B77 213 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 FBXL7Q9UJT9 491 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 OTOGLQ3ZCN5 2332 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 CHRNB4P30926 498 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 WT1-ASQ06250 92 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 FXYD3Q14802 87 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 TMEM200BQ69YZ2 307 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 ZNF329Q86UD4 541 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 OR2T6Q8NHC8 308 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 SMIM12Q96EX1 92 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 ZNF586Q9NXT0 402 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 E7EUB6 86 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 CD33P20138 364 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 BPIFB3P59826 476 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 TDRG1Q3Y452 100 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 TMEM108Q6UXF1 575 aa9.38□□□□□ -0.91
ZNF540-210ENST00000592533 FNDC4Q9H6D8 234 aaPredicted RBP9.38□□□□□ -0.91
ZNF540-210ENST00000592533 A0A1W2PS18 150 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 SUB1P53999 127 aaKnown RBP eCLIP9.37□□□□□ -0.91
ZNF540-210ENST00000592533 ADIPOQQ15848 244 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 C10orf113Q5VZT2 155 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 PATE2Q6UY27 113 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 OR4B1Q8NGF8 309 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 VAMP8Q9BV40 100 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 C7orf69Q9H7B7 122 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 MRPL27Q9P0M9 148 aaKnown RBP9.37□□□□□ -0.91
ZNF540-210ENST00000592533 AMMECR1Q9Y4X0 333 aaPredicted RBP9.37□□□□□ -0.91
ZNF540-210ENST00000592533 TRAV5A0A0B4J249 113 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 COX7A2P2O60397 106 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 RBMXL3Q8N7X1 1067 aaKnown RBP9.37□□□□□ -0.91
ZNF540-210ENST00000592533 FXYD5Q96DB9 178 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 PAXXQ9BUH6 204 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 ZNF355PQ9NSJ1 428 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 WASHC3Q9Y3C0 194 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 TBL2Q9Y4P3 447 aaKnown RBP9.37□□□□□ -0.91
ZNF540-210ENST00000592533 RNF114Q9Y508 228 aa9.37□□□□□ -0.91
ZNF540-210ENST00000592533 PEX7O00628 323 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 CRYGCP07315 174 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 CTRLP40313 264 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 DLX6P56179 175 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 SSBP2P81877 361 aaPredicted RBP9.36□□□□□ -0.91
ZNF540-210ENST00000592533 PAX2Q02962 417 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 SSX8Q7RTT4 187 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 NAV3Q8IVL0 2385 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 GRAMD2BQ96HH9 432 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 ICE1Q9Y2F5 2266 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 TMEM178BH3BS89 294 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 ZNF324O75467 553 aaPredicted RBP9.36□□□□□ -0.91
ZNF540-210ENST00000592533 CCL3L1P16619 93 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 CCL8P80075 99 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 MRGPRG-AS1Q2M3A8 158 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 ZCCHC24Q8N2G6 241 aaKnown RBP9.36□□□□□ -0.91
ZNF540-210ENST00000592533 VN1R17PQ8TDU5 208 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 RCHY1Q96PM5 261 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 CHRDL1Q9BU40 450 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 NRN1Q9NPD7 142 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 APCSP02743 223 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 MGST1P10620 155 aaKnown RBP9.36□□□□□ -0.91
ZNF540-210ENST00000592533 KLF12Q9Y4X4 402 aa9.36□□□□□ -0.91
ZNF540-210ENST00000592533 ZNF253O75346 499 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 SRIP30626 198 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 TCL1AP56279 114 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 KLF5Q13887 457 aaPredicted RBP9.35□□□□□ -0.91
ZNF540-210ENST00000592533 ZNF124Q15973 351 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 STXBP6Q8NFX7 210 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 KAAG1Q9UBP8 84 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 PPIAL4EA0A075B759 164 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 PPIAL4DF5H284 164 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 PPIAL4FP0DN26 164 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 PYYP10082 97 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 C19orf35Q6ZS72 473 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 ASCL5Q7RTU5 278 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 OR10X1Q8NGY0 326 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 NPIPB3Q92617 1050 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 PPIAL4AQ9Y536 164 aa9.35□□□□□ -0.91
ZNF540-210ENST00000592533 DPRXA6NFQ7 191 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 OR2J3O76001 311 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 MC5RP33032 325 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 AMTP48728 403 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 TBR1Q16650 682 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 ETFRF1Q6IPR1 90 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
ZNF540-210ENST00000592533 ZNF705AQ6ZN79 300 aaPredicted RBP9.34□□□□□ -0.91
ZNF540-210ENST00000592533 ATP5L2Q7Z4Y8 100 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 NIT1Q86X76 327 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 FAM168AQ92567 244 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 ATG101Q9BSB4 218 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 DIRC3C9JPN6 131 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 C16orf97H3BN30 126 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 SPINK4O60575 86 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 RPLP1P05386 114 aaKnown RBP9.34□□□□□ -0.91
ZNF540-210ENST00000592533 VMA21Q3ZAQ7 101 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 TSKUQ8WUA8 353 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 TRGV9Q99603 122 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms