RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 LRRC30A6NM36 301 aa10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 OR9G9P0C7N8 305 aa10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 SP9P0CG40 484 aa10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 KIR2DL2P43627 348 aaPredicted RBP10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 ZFAND6Q6FIF0 208 aa10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 NANOS1Q8WY41 292 aaKnown RBP10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 CITED2Q99967 270 aaPredicted RBP10.1□□□□□ -0.79
SMARCA4-217ENST00000591595 KNTC1P50748 2209 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 DIDO1Q9BTC0 2240 aaKnown RBP10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 A0A0G2JRQ6 117 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 CCDC179H3BU77 68 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 DEFA4P12838 97 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 TCL1AP56279 114 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 SPANXN5Q5MJ07 72 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 LINC00173Q6ZV60 143 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 OR4A16Q8NH70 328 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 SAP30LQ9HAJ7 183 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 FRYLO94915 3013 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 B3GALT5-AS1P59052 145 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 PDLIM3Q53GG5 364 aaPredicted RBP10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 TPPP3Q9BW30 176 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 PSENENQ9NZ42 101 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 CELSR3Q9NYQ7 3312 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 ESPL1Q14674 2120 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 IGKV1-6A0A0C4DH72 117 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 IGHV3-64DA0A0J9YX35 117 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 SH2D7A6NKC9 451 aaPredicted RBP10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 NGFP01138 241 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 COX5AP20674 150 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 FAM120AOSQ5T036 256 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 SPACA3Q8IXA5 215 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 MCRIP2Q9BUT9 160 aaKnown RBP10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 C1QTNF5Q9BXJ0 243 aa10.09□□□□□ -0.79
SMARCA4-217ENST00000591595 SCO2A0A1W2PP80 73 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 A0A1W2PRD5 423 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 A0A1W2PRF3 423 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 A0A1W2PRM7 423 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 TEX29Q8N6K0 151 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 PRDM14Q9GZV8 571 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 DNAJC13O75165 2243 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 WIPF1O43516 503 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 LEPROTL1O95214 131 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 ZNF146Q15072 292 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 SSX8Q7RTT4 187 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 SIGLEC8Q9NYZ4 499 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 CACNA1DQ01668 2161 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 SYNGR2O43760 224 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 SMIM13P0DJ93 91 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 DAZAP2Q15038 168 aaPredicted RBP10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 ZNF766Q5HY98 468 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 Q6AWC8 147 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 C20orf204Q6ZNR8 217 aa10.08□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A10PA6NDY2 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A18PA6NE21 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A16PA6NEW6 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A20PA6NIJ5 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A8PA6NJQ4 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A7PA6NKC0 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A22PA8MWA6 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A12PA8MX19 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A5PA8MXJ8 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A23PA8MXZ1 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A15PP0C7V4 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A13PP0C7W8 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A14PP0C7W9 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FAM90A24PP0C7X0 464 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 FOXG1P55316 489 aaPredicted RBP10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 SLC38A11Q08AI6 406 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 TRIP6Q15654 476 aaKnown RBP10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 TRIOBPQ9H2D6 2365 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 PRSS29PA6NIE9 313 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 CEACAM4O75871 244 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 TUSC2O75896 110 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 CT45A10P0DMU9 189 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 RPL8P62917 257 aaKnown RBP10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 CR1LQ2VPA4 569 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 SPINK14Q6IE38 97 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 DEPPQ9NTK1 212 aa10.07□□□□□ -0.8
SMARCA4-217ENST00000591595 K7ESF4 209 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 FOXH1O75593 365 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 APOMO95445 188 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 SPATA46Q5T0L3 261 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 Q6ZRM9 215 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 FGF23Q9GZV9 251 aaPredicted RBP10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 FREM2Q5SZK8 3169 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 KLF5Q13887 457 aaPredicted RBP10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 H1FXQ92522 213 aaKnown RBP10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 NRGNQ92686 78 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 ZNF331Q9NQX6 463 aaPredicted RBP10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 SIT1Q9Y3P8 196 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 FGF6P10767 208 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 VWC2Q2TAL6 325 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 C1orf210Q8IVY1 113 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 TDHQ8IZJ6 230 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 Q8TCH9 128 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 LRRC29Q8WV35 223 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 MAP1LC3CQ9BXW4 147 aa10.06□□□□□ -0.8
SMARCA4-217ENST00000591595 PATE3B3GLJ2 98 aa10.05□□□□□ -0.8
SMARCA4-217ENST00000591595 H3BMG7 143 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms