RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TMEM268Q5VZI3 342 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 RBPMS2Q6ZRY4 209 aaKnown RBP7.74□□□□□ -1.17
VPS4B-207ENST00000591519 Q6ZWC4 215 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 OR2C3Q8N628 320 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 LHFPL5Q8TAF8 219 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 RRNAD1Q96FB5 475 aaKnown RBP7.74□□□□□ -1.17
VPS4B-207ENST00000591519 TSC22D3Q99576 134 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 SPAG8Q99932 426 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-207ENST00000591519 TMEM222Q9H0R3 208 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 NDUFA4L2Q9NRX3 87 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 PRNDQ9UKY0 176 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 TP53TG1Q9Y2A0 90 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 HYDINQ4G0P3 5121 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 A0A0G2JRQ6 117 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 K7EMT4 169 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 TGOLN2O43493 480 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 IL7P13232 177 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 ATF4P18848 351 aaPredicted RBP7.73□□□□□ -1.17
VPS4B-207ENST00000591519 DHODHQ02127 395 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 SLC25A24Q6NUK1 477 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 SPSB3Q6PJ21 355 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 SELENOHQ8IZQ5 122 aaKnown RBP7.73□□□□□ -1.17
VPS4B-207ENST00000591519 OR1L6Q8NGR2 347 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 SCARB1Q8WTV0 552 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 GLYATL2Q8WU03 294 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 TMEM190Q8WZ59 177 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 LSM10Q969L4 123 aaKnown RBP7.73□□□□□ -1.17
VPS4B-207ENST00000591519 BSCL2Q96G97 398 aaPredicted RBP7.73□□□□□ -1.17
VPS4B-207ENST00000591519 DAZ1Q9NQZ3 744 aaKnown RBP7.73□□□□□ -1.17
VPS4B-207ENST00000591519 TMEM14BQ9NUH8 114 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 FKBP11Q9NYL4 201 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 SELENOKQ9Y6D0 94 aa7.73□□□□□ -1.17
VPS4B-207ENST00000591519 A0A0B4J293 547 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 IGHV3-35A0A0C4DH35 117 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 KIR2DL5BA0A0G2JN68 375 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 KIR2DL5BA0A0G2JPC4 375 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 NDUFA4O00483 81 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 UBE2CO00762 179 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 ST8SIA3O43173 380 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 ATG12O94817 140 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 IFNA17P01571 189 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 VAMP1P23763 118 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 BMI1P35226 326 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 MFAP2P55001 183 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 TNFRSF9Q07011 255 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 TMEM187Q14656 261 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 KIR2DL5AQ8N109 375 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 SLC35G3Q8N808 338 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 KIR2DL5BQ8NHK3 375 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 RBPMSQ93062 196 aaKnown RBP7.72□□□□□ -1.17
VPS4B-207ENST00000591519 TMEM56Q96MV1 263 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 CACNG5Q9UF02 275 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 FLVCR2Q9UPI3 526 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 KCNIP3Q9Y2W7 256 aa7.72□□□□□ -1.17
VPS4B-207ENST00000591519 F11RQ9Y624 299 aaKnown RBP7.72□□□□□ -1.17
VPS4B-207ENST00000591519 OR2T8A6NH00 312 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 CENPXA8MT69 81 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 B3GALNT1O75752 331 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 CDS2O95674 445 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 P0C879 139 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 HOXA1P49639 335 aaPredicted RBP7.71□□□□□ -1.18
VPS4B-207ENST00000591519 APOC4P55056 127 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 HSPE1P61604 102 aaKnown RBP7.71□□□□□ -1.18
VPS4B-207ENST00000591519 SUPT4H1P63272 117 aaKnown RBP7.71□□□□□ -1.18
VPS4B-207ENST00000591519 MLANAQ16655 118 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 LAMTOR1Q6IAA8 161 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 Q6ZRM9 215 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 OR5B3Q8NH48 314 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 GPR146Q96CH1 333 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 CHRDL1Q9BU40 450 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 PDCD10Q9BUL8 212 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 C21orf62Q9NYP8 219 aa7.71□□□□□ -1.18
VPS4B-207ENST00000591519 PLECQ15149 4684 aaKnown RBP7.7□□□□□ -1.18
VPS4B-207ENST00000591519 NAP1L6A6NFF2 107 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 C15orf62A8K5M9 175 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 K7EIM0 57 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 SPRY2O43597 315 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 IGHV3-48P01763 117 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 CTSGP08311 255 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 ANXA3P12429 323 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 FCGR2BP31994 310 aaPredicted RBP7.7□□□□□ -1.18
VPS4B-207ENST00000591519 PRCDQ00LT1 54 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 PPP1R1AQ13522 171 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 RBMS2Q15434 407 aaKnown RBP7.7□□□□□ -1.18
VPS4B-207ENST00000591519 ODF3L2Q3SX64 289 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 LYZL2Q7Z4W2 148 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 CENPSQ8N2Z9 138 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 OR1P1Q8NH06 330 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 LINC00476Q8WZB0 136 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 RNF183Q96D59 192 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 ZNF414Q96IQ9 312 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 SLC25A21Q9BQT8 299 aaPredicted RBP7.7□□□□□ -1.18
VPS4B-207ENST00000591519 ENY2Q9NPA8 101 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 PTTG2Q9NZH5 202 aa7.7□□□□□ -1.18
VPS4B-207ENST00000591519 A0A0J9YWU9 116 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 OR4C46A6NHA9 309 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 KRTAP9-7A8MTY7 169 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 PLA2G10O15496 165 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 LYRM1O43325 122 aa7.69□□□□□ -1.18
VPS4B-207ENST00000591519 ANXA7P20073 488 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms