RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 KLK11Q9UBX7 282 aa9.05□□□□□ -0.96
VAT1-206ENST00000589709 UBQLN2Q9UHD9 624 aa9.05□□□□□ -0.96
VAT1-206ENST00000589709 TRAV14DV4A0A0A6YYC5 116 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 LINC00854A0A1B0GVQ3 168 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 ATG12O94817 140 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 YIF1AO95070 293 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 IGKV1-5P01602 117 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 CD74P04233 296 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 CD5P06127 495 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 P0C879 139 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 RNASE12Q5GAN4 147 aaKnown RBP9.04□□□□□ -0.96
VAT1-206ENST00000589709 FAM90A2PQ658T7 463 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 PVRIGQ6DKI7 326 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 STEAP1BQ6NZ63 245 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 RNF183Q96D59 192 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 MAP6D1Q9H9H5 199 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 SCP2D1Q9UJQ7 156 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 ALMS1Q8TCU4 4167 aa9.04□□□□□ -0.96
VAT1-206ENST00000589709 A0A0B4J293 547 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 A0A0J9YWU9 116 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 DISC1C4P0D8 188 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 GNG7O60262 68 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 RAB3DO95716 219 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 PGAM2P15259 253 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 SNCAP37840 140 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 NPBWR1P48145 328 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 PIGPP57054 158 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 DEFB135Q30KP9 77 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 LYG2Q86SG7 212 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 TERB2Q8NHR7 220 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 PRRT1Q99946 306 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 GINS3Q9BRX5 216 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 MARVELD1Q9BSK0 173 aa9.03□□□□□ -0.96
VAT1-206ENST00000589709 C3orf85A0A1B0GTC6 90 aa9.02□□□□□ -0.97
VAT1-206ENST00000589709 B3GALNT1O75752 331 aa9.02□□□□□ -0.97
VAT1-206ENST00000589709 IGHV3-48P01763 117 aa9.02□□□□□ -0.97
VAT1-206ENST00000589709 CD3DP04234 171 aa9.02□□□□□ -0.97
VAT1-206ENST00000589709 PI3P19957 117 aa9.02□□□□□ -0.97
VAT1-206ENST00000589709 SUB1P53999 127 aaKnown RBP eCLIP9.02□□□□□ -0.973e-9■■■■□ 23.7
VAT1-206ENST00000589709 RBMS2Q15434 407 aaKnown RBP9.02□□□□□ -0.97
VAT1-206ENST00000589709 IZUMO4Q1ZYL8 232 aa9.02□□□□□ -0.97
VAT1-206ENST00000589709 TOMM20LQ6UXN7 152 aa9.02□□□□□ -0.97
VAT1-206ENST00000589709 ZFAND1Q8TCF1 268 aa9.02□□□□□ -0.97
VAT1-206ENST00000589709 PINX1Q96BK5 328 aaKnown RBP9.02□□□□□ -0.97
VAT1-206ENST00000589709 PPP1R14BQ96C90 147 aa9.02□□□□□ -0.97
VAT1-206ENST00000589709 TP53RKQ96S44 253 aa9.02□□□□□ -0.97
VAT1-206ENST00000589709 SLC25A21Q9BQT8 299 aaPredicted RBP9.02□□□□□ -0.97
VAT1-206ENST00000589709 VSIRQ9H7M9 311 aa9.02□□□□□ -0.97
VAT1-206ENST00000589709 IGHV3-49A0A0A0MS15 119 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 CXorf65A6NEN9 183 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 NUPR2A6NF83 97 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 CORTO00230 105 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 ST8SIA3O43173 380 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 PRAF2O60831 178 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 TMEM50AO95807 157 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 TCRBP04435 133 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 RPL35AP18077 110 aaKnown RBP9.01□□□□□ -0.97
VAT1-206ENST00000589709 UCP1P25874 307 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 BTCP35070 178 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 AKR1C2P52895 323 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 PAFAH1B2P68402 229 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 EWSR1Q01844 656 aaKnown RBP eCLIP9.01□□□□□ -0.97
VAT1-206ENST00000589709 ZNF600Q6ZNG1 722 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 APRG1Q8IVJ8 170 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 TMEM217Q8N7C4 229 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 SLC35G3Q8N808 338 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 CCDC71LQ8N9Z2 235 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 OR4C16Q8NGL9 310 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 SCGB3A2Q96PL1 93 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 CSTL1Q9H114 145 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 MCUBQ9NWR8 336 aa9.01□□□□□ -0.97
VAT1-206ENST00000589709 TRAV2A0A0B4J234 112 aa9□□□□□ -0.97
VAT1-206ENST00000589709 MPTX1A8MV57 137 aa9□□□□□ -0.97
VAT1-206ENST00000589709 INMT-MINDY4F8WBC2 141 aa9□□□□□ -0.97
VAT1-206ENST00000589709 NDUFB6O95139 128 aa9□□□□□ -0.97
VAT1-206ENST00000589709 IFNA17P01571 189 aa9□□□□□ -0.97
VAT1-206ENST00000589709 RNASE2P10153 161 aaKnown RBP9□□□□□ -0.97
VAT1-206ENST00000589709 BCAP31P51572 246 aa9□□□□□ -0.97
VAT1-206ENST00000589709 AARDQ4LEZ3 155 aa9□□□□□ -0.97
VAT1-206ENST00000589709 SPINK9Q5DT21 86 aa9□□□□□ -0.97
VAT1-206ENST00000589709 CEMP1Q6PRD7 247 aaPredicted RBP9□□□□□ -0.97
VAT1-206ENST00000589709 TCF24Q7RTU0 167 aa9□□□□□ -0.97
VAT1-206ENST00000589709 GATAD1Q8WUU5 269 aa9□□□□□ -0.97
VAT1-206ENST00000589709 LINC00476Q8WZB0 136 aa9□□□□□ -0.97
VAT1-206ENST00000589709 RRNAD1Q96FB5 475 aaKnown RBP9□□□□□ -0.97
VAT1-206ENST00000589709 PDCD10Q9BUL8 212 aa9□□□□□ -0.97
VAT1-206ENST00000589709 ZFAND3Q9H8U3 227 aa9□□□□□ -0.97
VAT1-206ENST00000589709 IGHV3OR16-13A0A075B7E8 117 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 IGHV3-74A0A0B4J1X5 117 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 PFDN1O60925 122 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 DFFBO76075 338 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 CDS2O95674 445 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 H2AFB2P0C5Z0 115 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 TFPI2P48307 235 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 BSXQ3C1V8 233 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 SP6Q3SY56 376 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 FAM219AQ8IW50 185 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 LILRB2Q8N423 598 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 OR4D10Q8NGI6 311 aa8.99□□□□□ -0.97
VAT1-206ENST00000589709 OR13C8Q8NGS7 320 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms