RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 CACNG5Q9UF02 275 aa10.79□□□□□ -0.68
DDX39A-208ENST00000588692 LOC102724200A0A096LPH7 203 aaPredicted RBP10.78□□□□□ -0.68
DDX39A-208ENST00000588692 TRAV14DV4A0A0A6YYC5 116 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 PIGBOS1A0A0B4J2F0 54 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 ZNF701M0R085 212 aaPredicted RBP10.78□□□□□ -0.68
DDX39A-208ENST00000588692 OPRK1P41145 380 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 HTR2BP41595 481 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 SRPXP78539 464 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 TMEM187Q14656 261 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 ZNF600Q6ZNG1 722 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 DEDD2Q8WXF8 326 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 TRIM63Q969Q1 353 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 TMEM230Q96A57 120 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 RHPN1-AS1Q9BWJ2 59 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 RBM38Q9H0Z9 239 aaKnown RBP10.78□□□□□ -0.68
DDX39A-208ENST00000588692 V9GYH0 126 aa10.78□□□□□ -0.68
DDX39A-208ENST00000588692 CHEK1O14757 476 aa10.77□□□□□ -0.69
DDX39A-208ENST00000588692 CD5P06127 495 aa10.77□□□□□ -0.69
DDX39A-208ENST00000588692 ANXA3P12429 323 aa10.77□□□□□ -0.69
DDX39A-208ENST00000588692 KLF9Q13886 244 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-208ENST00000588692 PYDC2Q56P42 97 aa10.77□□□□□ -0.69
DDX39A-208ENST00000588692 TOMM5Q8N4H5 51 aa10.77□□□□□ -0.69
DDX39A-208ENST00000588692 GPR146Q96CH1 333 aa10.77□□□□□ -0.69
DDX39A-208ENST00000588692 RETNQ9HD89 108 aa10.77□□□□□ -0.69
DDX39A-208ENST00000588692 HEYLQ9NQ87 328 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-208ENST00000588692 A0A0B4J2A0 478 aa10.76□□□□□ -0.69
DDX39A-208ENST00000588692 RPS10-NUDT3A0A1W2PQS6 291 aa10.76□□□□□ -0.69
DDX39A-208ENST00000588692 CLN5O75503 358 aa10.76□□□□□ -0.69
DDX39A-208ENST00000588692 TMEM50AO95807 157 aa10.76□□□□□ -0.69
DDX39A-208ENST00000588692 SULT1A3P0DMM9 295 aa10.76□□□□□ -0.69
DDX39A-208ENST00000588692 SULT1A4P0DMN0 295 aa10.76□□□□□ -0.69
DDX39A-208ENST00000588692 TOMM20LQ6UXN7 152 aa10.76□□□□□ -0.69
DDX39A-208ENST00000588692 OR4X1Q8NH49 305 aa10.76□□□□□ -0.69
DDX39A-208ENST00000588692 RNF2Q99496 336 aa10.76□□□□□ -0.69
DDX39A-208ENST00000588692 FNDC4Q9H6D8 234 aaPredicted RBP10.76□□□□□ -0.69
DDX39A-208ENST00000588692 SHPKQ9UHJ6 478 aa10.76□□□□□ -0.69
DDX39A-208ENST00000588692 CEBPZOSA8MTT3 80 aa10.75□□□□□ -0.69
DDX39A-208ENST00000588692 AKR1C4P17516 323 aa10.75□□□□□ -0.69
DDX39A-208ENST00000588692 SUPT4H1P63272 117 aaKnown RBP10.75□□□□□ -0.69
DDX39A-208ENST00000588692 ZNF79Q15937 498 aa10.75□□□□□ -0.69
DDX39A-208ENST00000588692 ODF3L2Q3SX64 289 aa10.75□□□□□ -0.69
DDX39A-208ENST00000588692 C2orf83Q53S99 150 aa10.75□□□□□ -0.69
DDX39A-208ENST00000588692 CCDC190Q86UF4 302 aa10.75□□□□□ -0.69
DDX39A-208ENST00000588692 SLC24A4Q8NFF2 622 aa10.75□□□□□ -0.69
DDX39A-208ENST00000588692 RNASEH2CQ8TDP1 164 aaKnown RBP10.75□□□□□ -0.69
DDX39A-208ENST00000588692 ZFAND3Q9H8U3 227 aa10.75□□□□□ -0.69
DDX39A-208ENST00000588692 PUS1Q9Y606 427 aaKnown RBP eCLIP10.75□□□□□ -0.69
DDX39A-208ENST00000588692 TRAV30A0A087WSZ9 112 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 SLC25A4P12235 298 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 CCR6P51684 374 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 APOC4P55056 127 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 CMC4P56277 68 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-208ENST00000588692 NMSQ5H8A3 153 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 NOXA1Q86UR1 476 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 LGI3Q8N145 548 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 IL17DQ8TAD2 202 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 VSIRQ9H7M9 311 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 UBQLN2Q9UHD9 624 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 DUXBA0A1W2PPF3 345 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 SMCO1Q147U7 214 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 TMEM128Q5BJH2 165 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 SPANXN2Q5MJ10 180 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 FAM90A2PQ658T7 463 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 SLC25A21Q9BQT8 299 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-208ENST00000588692 TMEM231Q9H6L2 316 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 MRPL36Q9P0J6 103 aaKnown RBP10.74□□□□□ -0.69
DDX39A-208ENST00000588692 HSPB7Q9UBY9 170 aa10.74□□□□□ -0.69
DDX39A-208ENST00000588692 IGHV3-49A0A0A0MS15 119 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 KIR2DL5BA0A0G2JN68 375 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 KIR2DL5BA0A0G2JPC4 375 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 A0A1B0GU03 582 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 NPY1RP25929 384 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 PAFAH1B2P68402 229 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 TNFRSF9Q07011 255 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 ETFRF1Q6IPR1 90 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 TMED4Q7Z7H5 227 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 KIR2DL5AQ8N109 375 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 KIR2DL5BQ8NHK3 375 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 PRR13Q9NZ81 148 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 TP53TG1Q9Y2A0 90 aa10.73□□□□□ -0.69
DDX39A-208ENST00000588692 IGHV3OR16-13A0A075B7E8 117 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 IGHV3-74A0A0B4J1X5 117 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 A0A1W2PS18 150 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 UBE2CO00762 179 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 NPPCP23582 126 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 MLANAQ16655 118 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 ZFAND6Q6FIF0 208 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 PRSS54Q6PEW0 395 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 Q6ZWC4 215 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 TCF24Q7RTU0 167 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 LYZL2Q7Z4W2 148 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 OR1S2Q8NGQ3 325 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 ST8SIA2Q92186 375 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 METTL26Q96S19 204 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 OVOL2Q9BRP0 275 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 U3KQ87 197 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 RYR3Q15413 4870 aa10.72□□□□□ -0.69
DDX39A-208ENST00000588692 TRAV2A0A0B4J234 112 aa10.71□□□□□ -0.69
DDX39A-208ENST00000588692 NXPH3O95157 252 aa10.71□□□□□ -0.69
DDX39A-208ENST00000588692 IGKV1-17P01599 117 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms