RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 U3KQ87 197 aa15.35■□□□□ 0.05
DDX39A-207ENST00000588542 C2orf70A6NJV1 201 aa15.34■□□□□ 0.05
DDX39A-207ENST00000588542 A8MWP6 167 aa15.34■□□□□ 0.05
DDX39A-207ENST00000588542 K7EIL1 84 aa15.34■□□□□ 0.05
DDX39A-207ENST00000588542 IL5P05113 134 aa15.34■□□□□ 0.05
DDX39A-207ENST00000588542 IAPPP10997 89 aa15.34■□□□□ 0.05
DDX39A-207ENST00000588542 OPRK1P41145 380 aa15.34■□□□□ 0.05
DDX39A-207ENST00000588542 ID3Q02535 119 aa15.34■□□□□ 0.05
DDX39A-207ENST00000588542 RNASEH2CQ8TDP1 164 aaKnown RBP15.34■□□□□ 0.05
DDX39A-207ENST00000588542 MAGT1Q9H0U3 335 aa15.34■□□□□ 0.05
DDX39A-207ENST00000588542 GAR1Q9NY12 217 aaKnown RBP15.34■□□□□ 0.05
DDX39A-207ENST00000588542 ZNF320A2RRD8 509 aa15.33■□□□□ 0.04
DDX39A-207ENST00000588542 TMEM213A2RRL7 107 aa15.33■□□□□ 0.04
DDX39A-207ENST00000588542 SYNGR2O43760 224 aa15.33■□□□□ 0.04
DDX39A-207ENST00000588542 IFNA10P01566 189 aa15.33■□□□□ 0.04
DDX39A-207ENST00000588542 DEFA1P59665 94 aa15.33■□□□□ 0.04
DDX39A-207ENST00000588542 DEFA3P59666 94 aa15.33■□□□□ 0.04
DDX39A-207ENST00000588542 NDUFA4O00483 81 aa15.32■□□□□ 0.04
DDX39A-207ENST00000588542 GNG7O60262 68 aa15.32■□□□□ 0.04
DDX39A-207ENST00000588542 MED6O75586 246 aa15.32■□□□□ 0.04
DDX39A-207ENST00000588542 TMEM50AO95807 157 aa15.32■□□□□ 0.04
DDX39A-207ENST00000588542 FOLR2P14207 255 aa15.32■□□□□ 0.04
DDX39A-207ENST00000588542 SPNP16150 400 aa15.32■□□□□ 0.04
DDX39A-207ENST00000588542 NPBWR1P48145 328 aa15.32■□□□□ 0.04
DDX39A-207ENST00000588542 IAH1Q2TAA2 248 aaPredicted RBP15.32■□□□□ 0.04
DDX39A-207ENST00000588542 TM4SF20Q53R12 229 aa15.32■□□□□ 0.04
DDX39A-207ENST00000588542 NOXA1Q86UR1 476 aa15.32■□□□□ 0.04
DDX39A-207ENST00000588542 C12orf45Q8N5I9 185 aaPredicted RBP15.32■□□□□ 0.04
DDX39A-207ENST00000588542 TMEM190Q8WZ59 177 aa15.32■□□□□ 0.04
DDX39A-207ENST00000588542 PRR25Q96S07 402 aa15.32■□□□□ 0.04
DDX39A-207ENST00000588542 ZNF256Q9Y2P7 627 aaPredicted RBP15.32■□□□□ 0.04
DDX39A-207ENST00000588542 C15orf62A8K5M9 175 aa15.31■□□□□ 0.04
DDX39A-207ENST00000588542 CCSO14618 274 aa15.31■□□□□ 0.04
DDX39A-207ENST00000588542 NUPL2O15504 423 aaKnown RBP15.31■□□□□ 0.04
DDX39A-207ENST00000588542 ZBTB8BQ8NAP8 495 aaPredicted RBP15.31■□□□□ 0.04
DDX39A-207ENST00000588542 UXS1Q8NBZ7 420 aa15.31■□□□□ 0.04
DDX39A-207ENST00000588542 OR4X1Q8NH49 305 aa15.31■□□□□ 0.04
DDX39A-207ENST00000588542 CACNG8Q8WXS5 425 aa15.31■□□□□ 0.04
DDX39A-207ENST00000588542 MARVELD1Q9BSK0 173 aa15.31■□□□□ 0.04
DDX39A-207ENST00000588542 RPS10-NUDT3A0A1W2PQS6 291 aa15.3■□□□□ 0.04
DDX39A-207ENST00000588542 WRBO00258 174 aa15.3■□□□□ 0.04
DDX39A-207ENST00000588542 CLN5O75503 358 aa15.3■□□□□ 0.04
DDX39A-207ENST00000588542 CBLN1P23435 193 aa15.3■□□□□ 0.04
DDX39A-207ENST00000588542 NKX2-1P43699 371 aaPredicted RBP15.3■□□□□ 0.04
DDX39A-207ENST00000588542 ELLP55199 621 aaPredicted RBP15.3■□□□□ 0.04
DDX39A-207ENST00000588542 ATP5IP56385 69 aaPredicted RBP15.3■□□□□ 0.04
DDX39A-207ENST00000588542 POLR2GP62487 172 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDX39A-207ENST00000588542 PRSS54Q6PEW0 395 aa15.3■□□□□ 0.04
DDX39A-207ENST00000588542 MRAPQ8TCY5 172 aa15.3■□□□□ 0.04
DDX39A-207ENST00000588542 PALMDQ9NP74 551 aa15.3■□□□□ 0.04
DDX39A-207ENST00000588542 TGP01266 2768 aa15.3■□□□□ 0.04
DDX39A-207ENST00000588542 IZUMO1RA6ND01 250 aa15.29■□□□□ 0.04
DDX39A-207ENST00000588542 INMT-MINDY4F8WBC2 141 aa15.29■□□□□ 0.04
DDX39A-207ENST00000588542 C8orf88P0DMB2 117 aa15.29■□□□□ 0.04
DDX39A-207ENST00000588542 RELQ04864 619 aaPredicted RBP15.29■□□□□ 0.04
DDX39A-207ENST00000588542 CIB3Q96Q77 187 aaPredicted RBP15.29■□□□□ 0.04
DDX39A-207ENST00000588542 UFC1Q9Y3C8 167 aa15.29■□□□□ 0.04
DDX39A-207ENST00000588542 IGHV3OR16-8A0A075B7F1 116 aa15.28■□□□□ 0.04
DDX39A-207ENST00000588542 LY86O95711 162 aa15.28■□□□□ 0.04
DDX39A-207ENST00000588542 SLC25A4P12235 298 aa15.28■□□□□ 0.04
DDX39A-207ENST00000588542 GP9P14770 177 aa15.28■□□□□ 0.04
DDX39A-207ENST00000588542 CD69Q07108 199 aa15.28■□□□□ 0.04
DDX39A-207ENST00000588542 DEFB114Q30KQ6 69 aa15.28■□□□□ 0.04
DDX39A-207ENST00000588542 TMEM116Q8NCL8 245 aa15.28■□□□□ 0.04
DDX39A-207ENST00000588542 GSKIPQ9P0R6 139 aa15.28■□□□□ 0.04
DDX39A-207ENST00000588542 PRAF2O60831 178 aa15.27■□□□□ 0.04
DDX39A-207ENST00000588542 IGKV1-17P01599 117 aa15.27■□□□□ 0.04
DDX39A-207ENST00000588542 IFNA4P05014 189 aa15.27■□□□□ 0.04
DDX39A-207ENST00000588542 RND2P52198 227 aa15.27■□□□□ 0.04
DDX39A-207ENST00000588542 CD300EQ496F6 205 aaPredicted RBP15.27■□□□□ 0.04
DDX39A-207ENST00000588542 ETFRF1Q6IPR1 90 aa15.27■□□□□ 0.04
DDX39A-207ENST00000588542 OR2K2Q8NGT1 345 aa15.27■□□□□ 0.04
DDX39A-207ENST00000588542 GPN1Q9HCN4 374 aaPredicted RBP15.27■□□□□ 0.04
DDX39A-207ENST00000588542 MLXQ9UH92 298 aa15.27■□□□□ 0.04
DDX39A-207ENST00000588542 SNRPGP15A8MWD9 76 aa15.26■□□□□ 0.03
DDX39A-207ENST00000588542 K7EMT4 169 aa15.26■□□□□ 0.03
DDX39A-207ENST00000588542 ZNF207O43670 478 aaKnown RBP15.26■□□□□ 0.03
DDX39A-207ENST00000588542 SSSCA1O60232 199 aa15.26■□□□□ 0.03
DDX39A-207ENST00000588542 MBPP02686 304 aaPredicted RBP15.26■□□□□ 0.03
DDX39A-207ENST00000588542 PAX9P55771 341 aa15.26■□□□□ 0.03
DDX39A-207ENST00000588542 TOMM20LQ6UXN7 152 aa15.26■□□□□ 0.03
DDX39A-207ENST00000588542 SLC16A13Q7RTY0 426 aa15.26■□□□□ 0.03
DDX39A-207ENST00000588542 DYNLRB2Q8TF09 96 aa15.26■□□□□ 0.03
DDX39A-207ENST00000588542 MARC2Q969Z3 335 aa15.26■□□□□ 0.03
DDX39A-207ENST00000588542 C20orf24Q9BUV8 137 aa15.26■□□□□ 0.03
DDX39A-207ENST00000588542 DAZ1Q9NQZ3 744 aaKnown RBP15.26■□□□□ 0.03
DDX39A-207ENST00000588542 TECRQ9NZ01 308 aaKnown RBP15.26■□□□□ 0.03
DDX39A-207ENST00000588542 MRPL27Q9P0M9 148 aaKnown RBP15.26■□□□□ 0.03
DDX39A-207ENST00000588542 RCL1Q9Y2P8 373 aaKnown RBP15.26■□□□□ 0.03
DDX39A-207ENST00000588542 LSM4Q9Y4Z0 139 aaKnown RBP15.26■□□□□ 0.03
DDX39A-207ENST00000588542 SELENOKQ9Y6D0 94 aa15.26■□□□□ 0.03
DDX39A-207ENST00000588542 FAM25EA8MYX2 175 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 PRSS46E5RG02 174 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 H3BP45 60 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 SCGB1D2O95969 90 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 IGLC1P0CG04 106 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 GPX4P36969 197 aaPredicted RBP15.25■□□□□ 0.03
DDX39A-207ENST00000588542 RAB11AP62491 216 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 TIGITQ495A1 244 aa15.25■□□□□ 0.03
DDX39A-207ENST00000588542 SPANXN5Q5MJ07 72 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms