RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 LOC102724200A0A096LPH7 203 aaPredicted RBP14.61□□□□□ -0.07
TPM4-208ENST00000588410 BMI1P35226 326 aa14.61□□□□□ -0.07
TPM4-208ENST00000588410 HTR2BP41595 481 aa14.61□□□□□ -0.07
TPM4-208ENST00000588410 TMEM187Q14656 261 aa14.61□□□□□ -0.07
TPM4-208ENST00000588410 CASC10Q5T4H9 136 aa14.61□□□□□ -0.07
TPM4-208ENST00000588410 PVRIGQ6DKI7 326 aa14.61□□□□□ -0.07
TPM4-208ENST00000588410 TMEM230Q96A57 120 aa14.61□□□□□ -0.07
TPM4-208ENST00000588410 EDA2RQ9HAV5 297 aa14.61□□□□□ -0.07
TPM4-208ENST00000588410 STAB2Q8WWQ8 2551 aa14.61□□□□□ -0.07
TPM4-208ENST00000588410 IGHV3-49A0A0A0MS15 119 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 RPS10-NUDT3A0A1W2PQS6 291 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 CHEK1O14757 476 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 TMEM50AO95807 157 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 SULT1A3P0DMM9 295 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 SULT1A4P0DMN0 295 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 SRPXP78539 464 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 KLF9Q13886 244 aaPredicted RBP14.6□□□□□ -0.07
TPM4-208ENST00000588410 ZNF600Q6ZNG1 722 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 RNF2Q99496 336 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 FAM110AQ9BQ89 295 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 PRR13Q9NZ81 148 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 UBQLN2Q9UHD9 624 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 V9GYH0 126 aa14.6□□□□□ -0.07
TPM4-208ENST00000588410 ZNF701M0R085 212 aaPredicted RBP14.59□□□□□ -0.07
TPM4-208ENST00000588410 TOMM20LQ6UXN7 152 aa14.59□□□□□ -0.07
TPM4-208ENST00000588410 TMED4Q7Z7H5 227 aa14.59□□□□□ -0.07
TPM4-208ENST00000588410 LGI3Q8N145 548 aa14.59□□□□□ -0.07
TPM4-208ENST00000588410 TRIM63Q969Q1 353 aa14.59□□□□□ -0.07
TPM4-208ENST00000588410 ZNF414Q96IQ9 312 aa14.59□□□□□ -0.07
TPM4-208ENST00000588410 RBM38Q9H0Z9 239 aaKnown RBP14.59□□□□□ -0.07
TPM4-208ENST00000588410 PUS1Q9Y606 427 aaKnown RBP eCLIP14.59□□□□□ -0.07
TPM4-208ENST00000588410 KMT2CQ8NEZ4 4911 aaKnown RBP14.58□□□□□ -0.08
TPM4-208ENST00000588410 IGHV3OR16-13A0A075B7E8 117 aa14.58□□□□□ -0.08
TPM4-208ENST00000588410 IGHV3-74A0A0B4J1X5 117 aa14.58□□□□□ -0.08
TPM4-208ENST00000588410 A0A0B4J2A0 478 aa14.58□□□□□ -0.08
TPM4-208ENST00000588410 PIGBOS1A0A0B4J2F0 54 aa14.58□□□□□ -0.08
TPM4-208ENST00000588410 CLN5O75503 358 aa14.58□□□□□ -0.08
TPM4-208ENST00000588410 NXPH3O95157 252 aa14.58□□□□□ -0.08
TPM4-208ENST00000588410 BSXQ3C1V8 233 aa14.58□□□□□ -0.08
TPM4-208ENST00000588410 SPANXN2Q5MJ10 180 aa14.58□□□□□ -0.08
TPM4-208ENST00000588410 SLC24A4Q8NFF2 622 aa14.58□□□□□ -0.08
TPM4-208ENST00000588410 OR4X1Q8NH49 305 aa14.58□□□□□ -0.08
TPM4-208ENST00000588410 FNDC4Q9H6D8 234 aaPredicted RBP14.58□□□□□ -0.08
TPM4-208ENST00000588410 SHPKQ9UHJ6 478 aa14.58□□□□□ -0.08
TPM4-208ENST00000588410 CD5P06127 495 aa14.57□□□□□ -0.08
TPM4-208ENST00000588410 CCR6P51684 374 aa14.57□□□□□ -0.08
TPM4-208ENST00000588410 MLANAQ16655 118 aa14.57□□□□□ -0.08
TPM4-208ENST00000588410 C2orf83Q53S99 150 aa14.57□□□□□ -0.08
TPM4-208ENST00000588410 ZFAND6Q6FIF0 208 aa14.57□□□□□ -0.08
TPM4-208ENST00000588410 CCDC190Q86UF4 302 aa14.57□□□□□ -0.08
TPM4-208ENST00000588410 NOXA1Q86UR1 476 aa14.57□□□□□ -0.08
TPM4-208ENST00000588410 DEDD2Q8WXF8 326 aa14.57□□□□□ -0.08
TPM4-208ENST00000588410 IGKV3-7A0A075B6H7 116 aa14.56□□□□□ -0.08
TPM4-208ENST00000588410 TRAV30A0A087WSZ9 112 aa14.56□□□□□ -0.08
TPM4-208ENST00000588410 TFPI2P48307 235 aa14.56□□□□□ -0.08
TPM4-208ENST00000588410 APOC4P55056 127 aa14.56□□□□□ -0.08
TPM4-208ENST00000588410 CMC4P56277 68 aaPredicted RBP14.56□□□□□ -0.08
TPM4-208ENST00000588410 SUPT4H1P63272 117 aaKnown RBP14.56□□□□□ -0.08
TPM4-208ENST00000588410 PAFAH1B2P68402 229 aa14.56□□□□□ -0.08
TPM4-208ENST00000588410 SMCO1Q147U7 214 aa14.56□□□□□ -0.08
TPM4-208ENST00000588410 ZNF79Q15937 498 aa14.56□□□□□ -0.08
TPM4-208ENST00000588410 LYZL2Q7Z4W2 148 aa14.56□□□□□ -0.08
TPM4-208ENST00000588410 RNASEH2CQ8TDP1 164 aaKnown RBP14.56□□□□□ -0.08
TPM4-208ENST00000588410 SLC25A4P12235 298 aa14.55□□□□□ -0.08
TPM4-208ENST00000588410 INPP1P49441 399 aa14.55□□□□□ -0.08
TPM4-208ENST00000588410 ODF3L2Q3SX64 289 aa14.55□□□□□ -0.08
TPM4-208ENST00000588410 TMEM128Q5BJH2 165 aa14.55□□□□□ -0.08
TPM4-208ENST00000588410 TCF24Q7RTU0 167 aa14.55□□□□□ -0.08
TPM4-208ENST00000588410 SLC25A21Q9BQT8 299 aaPredicted RBP14.55□□□□□ -0.08
TPM4-208ENST00000588410 TMEM231Q9H6L2 316 aa14.55□□□□□ -0.08
TPM4-208ENST00000588410 MRPL36Q9P0J6 103 aaKnown RBP14.55□□□□□ -0.08
TPM4-208ENST00000588410 A0A1B0GU03 582 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 IFNA10P01566 189 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 NPPCP23582 126 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 VAMP1P23763 118 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 NPY1RP25929 384 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 RPL11P62913 178 aaKnown RBP14.54□□□□□ -0.08
TPM4-208ENST00000588410 TNFRSF9Q07011 255 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 NMSQ5H8A3 153 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 ETFRF1Q6IPR1 90 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 GBGT1Q8N5D6 347 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 OR1S1Q8NH92 325 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 IL17DQ8TAD2 202 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 ST8SIA2Q92186 375 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 NARS2Q96I59 477 aaKnown RBP14.54□□□□□ -0.08
TPM4-208ENST00000588410 METTL26Q96S19 204 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 ZFAND3Q9H8U3 227 aa14.54□□□□□ -0.08
TPM4-208ENST00000588410 IGHV3-66A0A0C4DH42 116 aa14.53□□□□□ -0.08
TPM4-208ENST00000588410 A0A1W2PS18 150 aa14.53□□□□□ -0.08
TPM4-208ENST00000588410 DNASE2O00115 360 aaPredicted RBP14.53□□□□□ -0.08
TPM4-208ENST00000588410 RND2P52198 227 aa14.53□□□□□ -0.08
TPM4-208ENST00000588410 TIGITQ495A1 244 aa14.53□□□□□ -0.08
TPM4-208ENST00000588410 OR1S2Q8NGQ3 325 aa14.53□□□□□ -0.08
TPM4-208ENST00000588410 DTD1Q8TEA8 209 aa14.53□□□□□ -0.08
TPM4-208ENST00000588410 VSIRQ9H7M9 311 aa14.53□□□□□ -0.08
TPM4-208ENST00000588410 HSPB7Q9UBY9 170 aa14.53□□□□□ -0.08
TPM4-208ENST00000588410 U3KQ87 197 aa14.53□□□□□ -0.08
TPM4-208ENST00000588410 DUXBA0A1W2PPF3 345 aa14.52□□□□□ -0.09
TPM4-208ENST00000588410 APOHP02749 345 aaPredicted RBP14.52□□□□□ -0.09
TPM4-208ENST00000588410 TRIQKQ629K1 86 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms