RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	IGLV2-8	P01709	118 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	H2AFB1	P0C5Y9	115 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	CFC1B	P0CG36	223 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	IGKV1-13	P0DP09	117 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	NPY1R	P25929	384 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	RPL12	P30050	165 aa	Known RBP	3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	GABRA2	P47869	451 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	KCNJ3	P48549	501 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	SULT1A2	P50226	295 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	UCP3	P55916	312 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	PIGP	P57054	158 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	RPS16	P62249	146 aa	Known RBP	3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	MEF2C	Q06413	473 aa	Predicted RBP	3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	PJVK	Q0ZLH3	352 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	PRDX4	Q13162	271 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	ARL6IP1	Q15041	203 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	MORN3	Q6PF18	240 aa	Predicted RBP	3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	UQCC3	Q6UW78	93 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	SLC25A26	Q70HW3	274 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	CBLN2	Q8IUK8	224 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	ODF3L1	Q8IXM7	274 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	LRTM2	Q8N967	370 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	OR52M1	Q8NGK5	317 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	OR4D5	Q8NGN0	318 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	PLPPR1	Q8TBJ4	325 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	DYNLRB2	Q8TF09	96 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	GLYATL2	Q8WU03	294 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	EDARADD	Q8WWZ3	215 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	ARL11	Q969Q4	196 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	MOB3A	Q96BX8	217 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	NARS2	Q96I59	477 aa	Known RBP	3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	EAF1	Q96JC9	268 aa	Predicted RBP	3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	TP53RK	Q96S44	253 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	GPHA2	Q96T91	129 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	S100A13	Q99584	98 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	RASL11B	Q9BPW5	248 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	PAPOLG	Q9BWT3	736 aa	Known RBP	3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	NKX6-2	Q9C056	277 aa	Predicted RBP	3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	RGCC	Q9H4X1	137 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772		Q9H8V8	135 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	ZNF286A	Q9HBT8	521 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	MTCH1	Q9NZJ7	389 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	ST3GAL6	Q9Y274	331 aa		3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	RCL1	Q9Y2P8	373 aa	Known RBP	3.38	□□□□□ -1.87
MSI2-216	ENST00000582772	LSM5	Q9Y4Y9	91 aa	Known RBP	3.38	□□□□□ -1.87
MSI2-216	ENST00000582772		A0A087X0M5	115 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772		A0A1B0GX30	115 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	IGSF23	A1L1A6	192 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	NCBP2L	A6PVI3	153 aa	Known RBP	3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	ZNF732	B4DXR9	585 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	TRDC	B7Z8K6	153 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	CDIPT	O14735	213 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	TAAR5	O14804	337 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	ATP6V0E1	O15342	81 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	MPPED1	O15442	326 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	MED6	O75586	246 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	TUSC2	O75896	110 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	SCGB1D2	O95969	90 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	NAPSA	O96009	420 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	CST4	P01036	141 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	GAPDH	P04406	335 aa	Known RBP	3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	CD5	P06127	495 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	GLA	P06280	429 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	NFYB	P25208	207 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	DUSP1	P28562	367 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	GNRHR	P30968	328 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	CDKN1B	P46527	198 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	CAV2	P51636	162 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	GPM6A	P51674	278 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	KRTAP10-8	P60410	259 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	RPL37A	P61513	92 aa	Known RBP	3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	RND3	P61587	244 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	MALL	Q13021	153 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	HNF4G	Q14541	408 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	TMEM30B	Q3MIR4	351 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	XP32	Q5T750	250 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	FAM122C	Q6P4D5	195 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	TMEM88	Q6PEY1	159 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772		Q6ZS49	121 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	SAXO1	Q8IYX7	474 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	SELENOH	Q8IZQ5	122 aa	Known RBP	3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	CLRN3	Q8NCR9	226 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	LYPD6B	Q8NI32	183 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	RNF141	Q8WVD5	230 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	SAT2	Q96F10	170 aa	Predicted RBP	3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	CPNE2	Q96FN4	548 aa	Predicted RBP	3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	TSNAX	Q99598	290 aa	Known RBP	3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	GINS3	Q9BRX5	216 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	PARP12	Q9H0J9	701 aa	Known RBP	3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	SH3BGRL3	Q9H299	93 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	RHOF	Q9HBH0	211 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	TAF9B	Q9HBM6	251 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	TREM1	Q9NP99	234 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	SLC2A9	Q9NRM0	540 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	UQCC1	Q9NVA1	299 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	SLC7A11	Q9UPY5	501 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	FOXA2	Q9Y261	457 aa	Predicted RBP	3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	LINC00588	Q9Y4M8	146 aa		3.37	□□□□□ -1.87
MSI2-216	ENST00000582772	TRAV39	A0A0B4J263	110 aa		3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms