RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	RBMY1D	P0C7P1	496 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	ATP5I	P56385	69 aa	Predicted RBP	9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708		Q6ZRM9	215 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TOMM5	Q8N4H5	51 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TMEM116	Q8NCL8	245 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	OR4X1	Q8NH49	305 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	IL17D	Q8TAD2	202 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TRIM63	Q969Q1	353 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SLC25A21	Q9BQT8	299 aa	Predicted RBP	9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	GGTLC1	Q9BX51	225 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	RBM38	Q9H0Z9	239 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SHPK	Q9UHJ6	478 aa		9.41	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	DUXB	A0A1W2PPF3	345 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CLN5	O75503	358 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	YIF1A	O95070	293 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TMEM50A	O95807	157 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SULT1A3	P0DMM9	295 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SULT1A4	P0DMN0	295 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SLC25A4	P12235	298 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CCR6	P51684	374 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	KLF9	Q13886	244 aa	Predicted RBP	9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TMEM187	Q14656	261 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	C2orf83	Q53S99	150 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	PYDC2	Q56P42	97 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	SPINK9	Q5DT21	86 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	NMS	Q5H8A3	153 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CASC10	Q5T4H9	136 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	ETFRF1	Q6IPR1	90 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CCDC190	Q86UF4	302 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	LGI3	Q8N145	548 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TMEM230	Q96A57	120 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	GPR146	Q96CH1	333 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	ZNF414	Q96IQ9	312 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	RHPN1-AS1	Q9BWJ2	59 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TMEM231	Q9H6L2	316 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	HEYL	Q9NQ87	328 aa	Predicted RBP	9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	CACNG5	Q9UF02	275 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708		V9GYH0	126 aa		9.4	□□□□□ -0.9
CDK5RAP3-222	ENST00000581708	TRAV2	A0A0B4J234	112 aa		9.39	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	UBE2C	O00762	179 aa		9.39	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	CHEK1	O14757	476 aa		9.39	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	OPRK1	P41145	380 aa		9.39	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	PAFAH1B2	P68402	229 aa		9.39	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	TMEM128	Q5BJH2	165 aa		9.39	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	SPANXN2	Q5MJ10	180 aa		9.39	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	TOMM20L	Q6UXN7	152 aa		9.39	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	WFDC10A	Q9H1F0	79 aa		9.39	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	KIR2DL5B	A0A0G2JN68	375 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	KIR2DL5B	A0A0G2JPC4	375 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708		A0A1B0GU03	582 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708		A0A1W2PS18	150 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	CEBPZOS	A8MTT3	80 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	AKR1C4	P17516	323 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	APOC4	P55056	127 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	SUPT4H1	P63272	117 aa	Known RBP	9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	SMCO1	Q147U7	214 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	ZNF79	Q15937	498 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	FAM90A2P	Q658T7	463 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	KIR2DL5A	Q8N109	375 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	LRTM2	Q8N967	370 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	SLC24A4	Q8NFF2	622 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	KIR2DL5B	Q8NHK3	375 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	VSIR	Q9H7M9	311 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	ZFAND3	Q9H8U3	227 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	HSPB7	Q9UBY9	170 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	TP53TG1	Q9Y2A0	90 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	PUS1	Q9Y606	427 aa	Known RBP eCLIP	9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708		U3KQ87	197 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	TENM2	Q9NT68	2774 aa		9.38	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	DNAH7	Q8WXX0	4024 aa		9.37	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	IGHV3-48	P01763	117 aa		9.37	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	SLC25A6	P12236	298 aa		9.37	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	NPPC	P23582	126 aa		9.37	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	UBE2M	P61081	183 aa	Known RBP	9.37	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	TNFRSF9	Q07011	255 aa		9.37	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708		Q6ZWC4	215 aa		9.37	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	NARS2	Q96I59	477 aa	Known RBP	9.37	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	RNF2	Q99496	336 aa		9.37	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	FNDC4	Q9H6D8	234 aa	Predicted RBP	9.37	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	NDUFA13	Q9P0J0	144 aa		9.37	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	IGHV3OR16-8	A0A075B7F1	116 aa		9.36	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	NAP1L6	A6NFF2	107 aa		9.36	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	ZNF207	O43670	478 aa	Known RBP	9.36	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	DFFB	O76075	338 aa		9.36	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	NPY1R	P25929	384 aa		9.36	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	YPEL3	P61236	119 aa	Predicted RBP	9.36	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	ODF3L2	Q3SX64	289 aa		9.36	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	LYZL2	Q7Z4W2	148 aa		9.36	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	WFDC3	Q8IUB2	231 aa		9.36	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	OR1S2	Q8NGQ3	325 aa		9.36	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	SELENOK	Q9Y6D0	94 aa		9.36	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	FAM90A26	D6RGX4	464 aa		9.35	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	IGKV1-17	P01599	117 aa		9.35	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	CRYBB3	P26998	211 aa		9.35	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	RBMS2	Q15434	407 aa	Known RBP	9.35	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	PRSS54	Q6PEW0	395 aa		9.35	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	TCF24	Q7RTU0	167 aa		9.35	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708		Q8WTZ3	238 aa		9.35	□□□□□ -0.91
CDK5RAP3-222	ENST00000581708	METTL26	Q96S19	204 aa		9.35	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms