RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 ARL16Q0P5N6 197 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 ETFRF1Q6IPR1 90 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 HAPLN4Q86UW8 402 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 KLHL30-AS1Q8NEE0 82 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 OR10P1Q8NGE3 313 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 ZNF502Q8TBZ5 544 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 C4orf3Q8WVX3 66 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 CCDC140Q96MF4 163 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 OR5B12Q96R08 314 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 SLC25A31Q9H0C2 315 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 C21orf62Q9NYP8 219 aa12.3□□□□□ -0.44
CSNK1D-212ENST00000580061 A0A1W2PRX2 142 aa12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 F8W735 103 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 I3L521 148 aa12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 CST7O76096 145 aa12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 RPL12P30050 165 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 FCGR2BP31994 310 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 MFAP4P55083 255 aa12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 RUNX1Q01196 453 aa12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 EWSR1Q01844 656 aaKnown RBP eCLIP12.29□□□□□ -0.441e-6■□□□□ 10.6
CSNK1D-212ENST00000580061 SLC16A13Q7RTY0 426 aa12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 STX12Q86Y82 276 aa12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 CACNG8Q8WXS5 425 aa12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 MRPL36Q9P0J6 103 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-212ENST00000580061 FXYD6-FXYD2A0A087WZ82 144 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 NUDT19A8MXV4 375 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 NHLH2Q02577 135 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 BAXQ07812 192 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 CD300CQ08708 224 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 NSUN5P1Q3KNT7 163 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 FAM209BQ5JX69 171 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 ACSM6Q6P461 480 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 SHISA2Q6UWI4 295 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 CLEC19AQ6UXS0 136 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 C8orf86Q6ZUL3 223 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 ACOT7LQ6ZUV0 252 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 ZNF546Q86UE3 836 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 OR4X1Q8NH49 305 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 ATP6V0BQ99437 205 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 TXN2Q99757 166 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 NEURL2Q9BR09 285 aa12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 PEF1Q9UBV8 284 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-212ENST00000580061 ANKRD34BA5PLL1 514 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 TRBV12-3P01733 135 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 GPR183P32249 361 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 DLK1P80370 383 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 SLC38A11Q08AI6 406 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 GAMTQ14353 236 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 Q56UQ5 140 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 TMEM217Q8N7C4 229 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 UBAC2Q8NBM4 344 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 TMEM116Q8NCL8 245 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 OR11H4Q8NGC9 324 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 SLC35E1Q96K37 410 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 AQP10Q96PS8 301 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 GGACTQ9BVM4 153 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 TNFSF18Q9UNG2 199 aa12.27□□□□□ -0.45
CSNK1D-212ENST00000580061 FNDC10F2Z333 226 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 CLN5O75503 358 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 CLEC3BP05452 202 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 S100A11P31949 105 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 NPBWR1P48145 328 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 RND2P52198 227 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 HBG1P69891 147 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 HBG2P69892 147 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 DEFB136Q30KP8 78 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 BSCL2Q96G97 398 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 ACY3Q96HD9 319 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 GAR1Q9NY12 217 aaKnown RBP12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 HSPB11Q9Y547 144 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 STAB1Q9NY15 2570 aa12.26□□□□□ -0.45
CSNK1D-212ENST00000580061 IGHV4OR15-8A0A075B7B6 117 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 A0A087WW49 117 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 RNF222A6NCQ9 220 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 OR2T8A6NH00 312 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 HMSDA8MTL9 139 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 PPP5D1E7EU14 171 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 TGOLN2O43493 480 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 GNG7O60262 68 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 C1QBP02746 253 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 HSPB1P04792 205 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 NUP62P37198 522 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 INO80EQ8NBZ0 244 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 OR11H1Q8NG94 326 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 OR1S2Q8NGQ3 325 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 OR5C1Q8NGR4 320 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 NPIPB3Q92617 1050 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 ZC4H2Q9NQZ6 224 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 ANK2Q01484 3957 aa12.25□□□□□ -0.45
CSNK1D-212ENST00000580061 BMPR1BO00238 502 aa12.24□□□□□ -0.45
CSNK1D-212ENST00000580061 ARPC5O15511 151 aa12.24□□□□□ -0.45
CSNK1D-212ENST00000580061 CTSGP08311 255 aa12.24□□□□□ -0.45
CSNK1D-212ENST00000580061 ARL3P36405 182 aa12.24□□□□□ -0.45
CSNK1D-212ENST00000580061 ATP6V1FQ16864 119 aa12.24□□□□□ -0.45
CSNK1D-212ENST00000580061 VWC2Q2TAL6 325 aa12.24□□□□□ -0.45
CSNK1D-212ENST00000580061 LILRB2Q8N423 598 aa12.24□□□□□ -0.45
CSNK1D-212ENST00000580061 OR1N2Q8NGR9 330 aa12.24□□□□□ -0.45
CSNK1D-212ENST00000580061 RAX2Q96IS3 184 aa12.24□□□□□ -0.45
CSNK1D-212ENST00000580061 DUX3Q96PT4 197 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms