RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 TIMP3P35625 211 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 RPL13AP40429 203 aaKnown RBP9.05□□□□□ -0.96
RNF43-203ENST00000577716 LOXL3P58215 753 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 FAM90A2PQ658T7 463 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 BMPERQ8N8U9 685 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 IGHV3OR16-13A0A075B7E8 117 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 IGHV3-74A0A0B4J1X5 117 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 WIPF3A6NGB9 483 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 ZNF502Q8TBZ5 544 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 IGHV1-18A0A0C4DH31 117 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 ZNF207O43670 478 aaKnown RBP9.05□□□□□ -0.96
RNF43-203ENST00000577716 TMEM50AO95807 157 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 PSMB2P49721 201 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 RPS20P60866 119 aaKnown RBP9.05□□□□□ -0.96
RNF43-203ENST00000577716 LEMD1Q68G75 181 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 METTL26Q96S19 204 aa9.05□□□□□ -0.96
RNF43-203ENST00000577716 SSBP4Q9BWG4 385 aaPredicted RBP9.05□□□□□ -0.96
RNF43-203ENST00000577716 RPP21Q9H633 154 aaKnown RBP9.05□□□□□ -0.96
RNF43-203ENST00000577716 IGKV1-6A0A0C4DH72 117 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 B9A039 149 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 NUDT3O95989 172 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 LINC00205P59089 165 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 PRCDQ00LT1 54 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 BSPH1Q075Z2 132 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 Q6P435 159 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 METRNQ9UJH8 293 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 NCOA6Q14686 2063 aaPredicted RBP9.04□□□□□ -0.96
RNF43-203ENST00000577716 MALRD1Q5VYJ5 2156 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 CA1P00915 261 aaPredicted RBP9.04□□□□□ -0.96
RNF43-203ENST00000577716 GNG5P63218 68 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 RBPMS2Q6ZRY4 209 aaKnown RBP9.04□□□□□ -0.96
RNF43-203ENST00000577716 PSG9Q00887 426 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 SAPCD1Q5SSQ6 148 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 LINC01560Q8TB33 94 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 DPF1Q92782 380 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 DPM3Q9P2X0 92 aa9.04□□□□□ -0.96
RNF43-203ENST00000577716 MUC21A0A0G2JKD1 596 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 MUC21A0A140T8X8 626 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 LINC00473A8K010 186 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 DLX1P56177 255 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 CX3CL1P78423 397 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 MUC21Q5SSG8 566 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 AGMATQ9BSE5 352 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 SEPSECSQ9HD40 501 aaKnown RBP9.03□□□□□ -0.96
RNF43-203ENST00000577716 DCAF16Q9NXF7 216 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 FOXA2Q9Y261 457 aaPredicted RBP9.03□□□□□ -0.96
RNF43-203ENST00000577716 F11RQ9Y624 299 aaKnown RBP9.03□□□□□ -0.96
RNF43-203ENST00000577716 SPG11Q96JI7 2443 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 PLXNB3Q9ULL4 1909 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 LOC105371242A0A075B767 164 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 PF4V1P10720 104 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 APOBEC3AP31941 199 aaPredicted RBP9.03□□□□□ -0.96
RNF43-203ENST00000577716 SPATA31B1PQ5VZV4 182 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 OR10W1Q8NGF6 305 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 Q9H3A6 140 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 ELOVL5Q9NYP7 299 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 FAM90A9PA6NNJ1 464 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 ZNF324O75467 553 aaPredicted RBP9.03□□□□□ -0.96
RNF43-203ENST00000577716 APOHP02749 345 aaPredicted RBP9.03□□□□□ -0.96
RNF43-203ENST00000577716 FABP2P12104 132 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 PRB3Q04118 309 aaPredicted RBP9.03□□□□□ -0.96
RNF43-203ENST00000577716 FOXL1Q12952 345 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 RSPO1Q2MKA7 263 aaPredicted RBP9.03□□□□□ -0.96
RNF43-203ENST00000577716 ZNF585BQ52M93 769 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 TMEM256Q8N2U0 113 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 TEX45Q8NA69 505 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 ZGRF1Q86YA3 2104 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 FOXI3A8MTJ6 420 aaPredicted RBP9.03□□□□□ -0.96
RNF43-203ENST00000577716 SNAI2O43623 268 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 PCP4P48539 62 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 C10orf55Q5SWW7 151 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 OR10J6PQ8NGY7 276 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 FREM1Q5H8C1 2179 aa9.03□□□□□ -0.96
RNF43-203ENST00000577716 TRAV3A0A0B4J244 114 aa9.02□□□□□ -0.97
RNF43-203ENST00000577716 COQ2Q96H96 371 aa9.02□□□□□ -0.97
RNF43-203ENST00000577716 KLK15Q9H2R5 256 aa9.02□□□□□ -0.97
RNF43-203ENST00000577716 RPUSD1Q9UJJ7 312 aaKnown RBP9.02□□□□□ -0.97
RNF43-203ENST00000577716 COLCA1Q6ZS62 124 aa9.02□□□□□ -0.97
RNF43-203ENST00000577716 C18orf15Q96N68 181 aa9.02□□□□□ -0.97
RNF43-203ENST00000577716 IGHV3OR16-8A0A075B7F1 116 aa9.02□□□□□ -0.97
RNF43-203ENST00000577716 ZNF414Q96IQ9 312 aa9.02□□□□□ -0.97
RNF43-203ENST00000577716 GNB1LQ9BYB4 327 aa9.02□□□□□ -0.97
RNF43-203ENST00000577716 EPDR1Q9UM22 224 aa9.02□□□□□ -0.97
RNF43-203ENST00000577716 SOX21Q9Y651 276 aaPredicted RBP9.02□□□□□ -0.97
RNF43-203ENST00000577716 TICRRQ7Z2Z1 1910 aa9.02□□□□□ -0.97
RNF43-203ENST00000577716 C7orf71A4D174 169 aa9.01□□□□□ -0.97
RNF43-203ENST00000577716 TFPI2P48307 235 aa9.01□□□□□ -0.97
RNF43-203ENST00000577716 PLP1P60201 277 aa9.01□□□□□ -0.97
RNF43-203ENST00000577716 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
RNF43-203ENST00000577716 PRELID3AQ96N28 172 aa9.01□□□□□ -0.97
RNF43-203ENST00000577716 MGST2Q99735 147 aa9.01□□□□□ -0.97
RNF43-203ENST00000577716 IGHV3-49A0A0A0MS15 119 aa9.01□□□□□ -0.97
RNF43-203ENST00000577716 TRAV5A0A0B4J249 113 aa9.01□□□□□ -0.97
RNF43-203ENST00000577716 TCRBV4S1A1TA0A5B7 111 aa9.01□□□□□ -0.97
RNF43-203ENST00000577716 C15orf62A8K5M9 175 aa9.01□□□□□ -0.97
RNF43-203ENST00000577716 CSRP1P21291 193 aaKnown RBP9.01□□□□□ -0.97
RNF43-203ENST00000577716 CD177Q8N6Q3 437 aa9.01□□□□□ -0.97
RNF43-203ENST00000577716 FAM57AQ8TBR7 257 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms