RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 MRPS16Q9Y3D3 137 aaKnown RBP11.92□□□□□ -0.5
SCARF1-209ENST00000576012 ATMQ13315 3056 aa11.92□□□□□ -0.5
SCARF1-209ENST00000576012 IGLV2-8P01709 118 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 TXNDC17Q9BRA2 123 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 LSM4Q9Y4Z0 139 aaKnown RBP11.91□□□□□ -0.5
SCARF1-209ENST00000576012 TANC2Q9HCD6 1990 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 ISLRO14498 428 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 TOMM40O96008 361 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 LINC00869P0C866 280 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 PPOXP50336 477 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 ACP7Q6ZNF0 438 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 NUDT11Q96G61 164 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 KLF13Q9Y2Y9 288 aaPredicted RBP11.91□□□□□ -0.5
SCARF1-209ENST00000576012 AREGP15514 252 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 CD177Q8N6Q3 437 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 TMEM116Q8NCL8 245 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 OSTCQ9NRP0 149 aa11.91□□□□□ -0.5
SCARF1-209ENST00000576012 PKDREJQ9NTG1 2253 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 TRAV9-1A0A075B6T8 112 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 IZUMO1RA6ND01 250 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 PRSS46E5RG02 174 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 SSBP2P81877 361 aaPredicted RBP11.9□□□□□ -0.5
SCARF1-209ENST00000576012 TMEM70Q9BUB7 260 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 LINC00470Q9BZP3 86 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 B4GALT7Q9UBV7 327 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 PIEZO2Q9H5I5 2752 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 IGKV3D-15A0A087WSY6 115 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 IGHV3-21A0A0B4J1V1 117 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 PPIAL4DF5H284 164 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 TAX1BP3O14907 124 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 WDR82Q6UXN9 313 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 MUC15Q8N387 334 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 TMEM105Q8N8V8 129 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 C11orf52Q96A22 123 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 PGLYRP4Q96LB8 373 aa11.9□□□□□ -0.5
SCARF1-209ENST00000576012 INTS1Q8N201 2190 aaKnown RBP11.9□□□□□ -0.5
SCARF1-209ENST00000576012 DMXL1Q9Y485 3027 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 J3QR06 171 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 K7EP13 123 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 MORN2Q502X0 79 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 OR2Z1Q8NG97 314 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 CT55Q8WUE5 264 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 NANOS1Q8WY41 292 aaKnown RBP11.89□□□□□ -0.51
SCARF1-209ENST00000576012 FNDC4Q9H6D8 234 aaPredicted RBP11.89□□□□□ -0.51
SCARF1-209ENST00000576012 AMMECR1Q9Y4X0 333 aaPredicted RBP11.89□□□□□ -0.51
SCARF1-209ENST00000576012 C2orf70A6NJV1 201 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 C11orf53Q8IXP5 236 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 VWC2LB2RUY7 222 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 PRDX2P32119 198 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 PSG9Q00887 426 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 TPPP3Q9BW30 176 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 MEGF9Q9H1U4 602 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 TMEM167BQ9NRX6 74 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 OR51B2Q9Y5P1 312 aa11.89□□□□□ -0.51
SCARF1-209ENST00000576012 TRAV8-6A0A0B4J262 113 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 ZNF766Q5HY98 468 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 DUX4L9Q6RFH8 374 aaPredicted RBP11.88□□□□□ -0.51
SCARF1-209ENST00000576012 HES4Q9HCC6 221 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 PLCE1Q9P212 2302 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 DMXL2Q8TDJ6 3036 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 SMIM27A0A1W2PRY6 76 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 GAGE12BA1L429 117 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 H0YJW9 148 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 RAB37Q96AX2 223 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 SARAFQ96BY9 339 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 FAM173AQ9BQD7 235 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 SAP30LQ9HAJ7 183 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 ABI3Q9P2A4 366 aa11.88□□□□□ -0.51
SCARF1-209ENST00000576012 PCNX1Q96RV3 2341 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 ADAMTS20P59510 1910 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 TRAV30A0A087WSZ9 112 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 SAA2-SAA4A0A096LPE2 208 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 LEPROTL1O95214 131 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 REG1BP48304 166 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 FXYD7P58549 80 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 NRN1LQ496H8 165 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 IGKV1-16P04430 117 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 HSPE1P61604 102 aaKnown RBP11.87□□□□□ -0.51
SCARF1-209ENST00000576012 SPRNQ5BIV9 151 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 SLC25A34Q6PIV7 304 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 HILPDAQ9Y5L2 63 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 TNRC6AQ8NDV7 1962 aaKnown RBP11.87□□□□□ -0.51
SCARF1-209ENST00000576012 KLK10O43240 276 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 WISP2O76076 250 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 SP1P08047 785 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 PRR20EP86478 221 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 PRR20CP86479 221 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 PRR20DP86480 221 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 PRR20BP86481 221 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 PRR20AP86496 221 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 TBR1Q16650 682 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 TMEM249Q2WGJ8 235 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 BVES-AS1Q5T3Y7 98 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 UBALD2Q8IYN6 164 aa11.87□□□□□ -0.51
SCARF1-209ENST00000576012 TEX45Q8NA69 505 aa11.86□□□□□ -0.51
SCARF1-209ENST00000576012 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.86□□□□□ -0.51
SCARF1-209ENST00000576012 C15orf65H3BRN8 121 aa11.86□□□□□ -0.51
SCARF1-209ENST00000576012 ORM2P19652 201 aa11.86□□□□□ -0.51
SCARF1-209ENST00000576012 URB1-AS1Q96HZ7 61 aa11.86□□□□□ -0.51
SCARF1-209ENST00000576012 C15orf61A6NNL5 157 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms