RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 H0YIZ8 118 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 L7N2F9 121 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 CCNKO75909 580 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 PF4P02776 101 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 CLEC3BP05452 202 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 OR8U8P0C7N1 319 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 SLURP1P55000 103 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 MFAP4P55083 255 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 TAS2R30P59541 319 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 RAB11AP62491 216 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 VAMP2P63027 116 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 CD69Q07108 199 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 ZNF616Q08AN1 781 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 FHL3Q13643 280 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 Q56UQ5 140 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 ACSM6Q6P461 480 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 UBAC2Q8NBM4 344 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 PPP1R1CQ8WVI7 109 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 ZC4H2Q9NQZ6 224 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 OR5AC2Q9NZP5 309 aa6.59□□□□□ -1.35
NUP88-211ENST00000575976 MRPL36Q9P0J6 103 aaKnown RBP6.59□□□□□ -1.35
NUP88-211ENST00000575976 RPS10-NUDT3A0A1W2PQS6 291 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 OR2T8A6NH00 312 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 BMPR1BO00238 502 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 TGOLN2O43493 480 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 TSC22D2O75157 780 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 DEDDO75618 318 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 OR2C1O95371 312 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 MPC2O95563 127 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 RLN2P04090 185 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 METTL15P1P0C7V9 234 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 PVALBP20472 110 aaPredicted RBP6.58□□□□□ -1.36
NUP88-211ENST00000575976 FCGR2BP31994 310 aaPredicted RBP6.58□□□□□ -1.36
NUP88-211ENST00000575976 GPR183P32249 361 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 ARL3P36405 182 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 BCAP31P51572 246 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 FAM209BQ5JX69 171 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 PRR31Q5SQ13 230 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 TMEM14EPQ6UXP3 125 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 LINC00482Q8N8I6 264 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 CHAC2Q8WUX2 184 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 TXN2Q99757 166 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 RNF126Q9BV68 326 aa6.58□□□□□ -1.36
NUP88-211ENST00000575976 ZNF436Q9C0F3 470 aaPredicted RBP6.58□□□□□ -1.36
NUP88-211ENST00000575976 TRAV14DV4A0A0A6YYC5 116 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 PRSS46E5RG02 174 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 E5RGE8 158 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 GNG7O60262 68 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 GGCTO75223 188 aaKnown RBP6.57□□□□□ -1.36
NUP88-211ENST00000575976 GIPP09681 153 aaPredicted RBP6.57□□□□□ -1.36
NUP88-211ENST00000575976 SLC25A4P12235 298 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 ZP3P21754 424 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 HOXD3P31249 432 aaPredicted RBP6.57□□□□□ -1.36
NUP88-211ENST00000575976 GPX4P36969 197 aaPredicted RBP6.57□□□□□ -1.36
NUP88-211ENST00000575976 NPBWR1P48145 328 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 CAV2P51636 162 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 RND2P52198 227 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 ARL16Q0P5N6 197 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 OR8G2PQ6IF36 304 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 ETFRF1Q6IPR1 90 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 PRSS54Q6PEW0 395 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 SLC16A13Q7RTY0 426 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 HAPLN4Q86UW8 402 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 TMEM252Q8N6L7 170 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 OR4X1Q8NH49 305 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 DCUN1D4Q92564 292 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 DLX4Q92988 240 aaPredicted RBP6.57□□□□□ -1.36
NUP88-211ENST00000575976 BSCL2Q96G97 398 aaPredicted RBP6.57□□□□□ -1.36
NUP88-211ENST00000575976 ATP6V0BQ99437 205 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 CHRDL1Q9BU40 450 aa6.57□□□□□ -1.36
NUP88-211ENST00000575976 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 IGHV3-35A0A0C4DH35 117 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 IGSF23A1L1A6 192 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 NUPL2O15504 423 aaKnown RBP6.56□□□□□ -1.36
NUP88-211ENST00000575976 CLN5O75503 358 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 CST7O76096 145 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 CTSGP08311 255 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 ADMP35318 185 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 P2RY1P47900 373 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 KLF5Q13887 457 aaPredicted RBP6.56□□□□□ -1.36
NUP88-211ENST00000575976 GAMTQ14353 236 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 RPEL1Q2QD12 228 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 Q5BKY6 102 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 SPSB3Q6PJ21 355 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 TMEM116Q8NCL8 245 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 OR10P1Q8NGE3 313 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 SVIPQ8NHG7 77 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 CACNG8Q8WXS5 425 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 NPIPB3Q92617 1050 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 ACY3Q96HD9 319 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 ZNF414Q96IQ9 312 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 SLC35E1Q96K37 410 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 LYRM2Q9NU23 88 aaPredicted RBP6.56□□□□□ -1.36
NUP88-211ENST00000575976 GAR1Q9NY12 217 aaKnown RBP6.56□□□□□ -1.36
NUP88-211ENST00000575976 MBD2Q9UBB5 411 aa6.56□□□□□ -1.36
NUP88-211ENST00000575976 OVOL1O14753 267 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 IGLC1P0CG04 106 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 PET100P0DJ07 73 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 LYL1P12980 280 aa6.55□□□□□ -1.36
NUP88-211ENST00000575976 CD33P20138 364 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms