RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	OR11H1	Q8NG94	326 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895	OR1P1	Q8NH06	330 aa		11.13	□□□□□ -0.63
ABR-223	ENST00000573895	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.13	□□□□□ -0.63
ABR-223	ENST00000573895	FAM24A	A6NFZ4	105 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	ARPC5	O15511	151 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	OR8U8	P0C7N1	319 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	RNASE2	P10153	161 aa	Known RBP	11.12	□□□□□ -0.63
ABR-223	ENST00000573895	AREG	P15514	252 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	C4BPB	P20851	252 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	SULT1A1	P50225	295 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	ZNF345	Q14585	488 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	DEFB136	Q30KP8	78 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	PVRIG	Q6DKI7	326 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.12	□□□□□ -0.63
ABR-223	ENST00000573895	DUX3	Q96PT4	197 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	FAM103A1	Q9BTL3	118 aa	Known RBP	11.12	□□□□□ -0.63
ABR-223	ENST00000573895	GNB4	Q9HAV0	340 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	ZC4H2	Q9NQZ6	224 aa		11.12	□□□□□ -0.63
ABR-223	ENST00000573895	F11R	Q9Y624	299 aa	Known RBP	11.12	□□□□□ -0.63
ABR-223	ENST00000573895	C15orf62	A8K5M9	175 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	CORT	O00230	105 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	PRB2	P02812	416 aa	Predicted RBP	11.11	□□□□□ -0.63
ABR-223	ENST00000573895	IFNA4	P05014	189 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	DEFA4	P12838	97 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	HIST1H1B	P16401	226 aa	Known RBP	11.11	□□□□□ -0.63
ABR-223	ENST00000573895	S100A11	P31949	105 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	EIF2B2	P49770	351 aa	Known RBP	11.11	□□□□□ -0.63
ABR-223	ENST00000573895	HBG1	P69891	147 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	HBG2	P69892	147 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	ZNF616	Q08AN1	781 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	KLK9	Q2XQG4	91 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	ASPHD1	Q5U4P2	390 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	OR10P1	Q8NGE3	313 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	OR1N2	Q8NGR9	330 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	OR4C12	Q96R67	309 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	KLK9	Q9UKQ9	250 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	SORL1	Q92673	2214 aa		11.11	□□□□□ -0.63
ABR-223	ENST00000573895	IGSF23	A1L1A6	192 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895		H3BP45	60 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	TAAR5	O14804	337 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	LGALS1	P09382	135 aa	Known RBP	11.1	□□□□□ -0.63
ABR-223	ENST00000573895	METTL15P1	P0C7V9	234 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	GPX4	P36969	197 aa	Predicted RBP	11.1	□□□□□ -0.63
ABR-223	ENST00000573895	KRTAP10-11	P60412	298 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
ABR-223	ENST00000573895	ATP6V1F	Q16864	119 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	C9orf66	Q5T8R8	295 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	KCNRG	Q8N5I3	272 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	MRAP	Q8TCY5	172 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	CACNG8	Q8WXS5	425 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	PINX1	Q96BK5	328 aa	Known RBP	11.1	□□□□□ -0.63
ABR-223	ENST00000573895	GGACT	Q9BVM4	153 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	THYN1	Q9P016	225 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	PAIP2B	Q9ULR5	123 aa	Known RBP	11.1	□□□□□ -0.63
ABR-223	ENST00000573895	HSPB11	Q9Y547	144 aa		11.1	□□□□□ -0.63
ABR-223	ENST00000573895	RNF222	A6NCQ9	220 aa		11.09	□□□□□ -0.63
ABR-223	ENST00000573895	PMS2P5	A8MQ11	134 aa		11.09	□□□□□ -0.63
ABR-223	ENST00000573895	REG1A	P05451	166 aa		11.09	□□□□□ -0.63
ABR-223	ENST00000573895	APELA	P0DMC3	54 aa		11.09	□□□□□ -0.63
ABR-223	ENST00000573895	INSL3	P51460	131 aa		11.09	□□□□□ -0.63
ABR-223	ENST00000573895	AP2S1	P53680	142 aa	Predicted RBP	11.09	□□□□□ -0.63
ABR-223	ENST00000573895	NHLH2	Q02577	135 aa		11.09	□□□□□ -0.63
ABR-223	ENST00000573895	EXOSC2	Q13868	293 aa	Known RBP	11.09	□□□□□ -0.63
ABR-223	ENST00000573895	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.09	□□□□□ -0.63
ABR-223	ENST00000573895	ETFRF1	Q6IPR1	90 aa		11.09	□□□□□ -0.63
ABR-223	ENST00000573895	SLC25A24	Q6NUK1	477 aa		11.09	□□□□□ -0.63
ABR-223	ENST00000573895	OR5T1	Q8NG75	326 aa		11.09	□□□□□ -0.63
ABR-223	ENST00000573895	OR1S2	Q8NGQ3	325 aa		11.09	□□□□□ -0.63
ABR-223	ENST00000573895	COL7A1	Q02388	2944 aa		11.08	□□□□□ -0.63
ABR-223	ENST00000573895		A0A0G2JLM5	398 aa		11.08	□□□□□ -0.64
ABR-223	ENST00000573895	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.08	□□□□□ -0.64
ABR-223	ENST00000573895	FNDC10	F2Z333	226 aa		11.08	□□□□□ -0.64
ABR-223	ENST00000573895	BOLA2-SMG1P6	H3BVE0	249 aa		11.08	□□□□□ -0.64
ABR-223	ENST00000573895	CST7	O76096	145 aa		11.08	□□□□□ -0.64
ABR-223	ENST00000573895	CXCL2	P19875	107 aa		11.08	□□□□□ -0.64
ABR-223	ENST00000573895	HOXD3	P31249	432 aa	Predicted RBP	11.08	□□□□□ -0.64
ABR-223	ENST00000573895	TPPP2	P59282	170 aa		11.08	□□□□□ -0.64
ABR-223	ENST00000573895	TMUB2	Q71RG4	321 aa		11.08	□□□□□ -0.64
ABR-223	ENST00000573895	C9orf62	Q8N4C0	152 aa		11.08	□□□□□ -0.64
ABR-223	ENST00000573895	TMEM170A	Q8WVE7	144 aa		11.08	□□□□□ -0.64
ABR-223	ENST00000573895	LINC01619	G3V211	115 aa		11.07	□□□□□ -0.64
ABR-223	ENST00000573895		K7EIL1	84 aa		11.07	□□□□□ -0.64
ABR-223	ENST00000573895	DFFB	O76075	338 aa		11.07	□□□□□ -0.64
ABR-223	ENST00000573895	TRGV3	P03979	118 aa		11.07	□□□□□ -0.64
ABR-223	ENST00000573895	HSPB1	P04792	205 aa	Known RBP	11.07	□□□□□ -0.64
ABR-223	ENST00000573895	DLK1	P80370	383 aa		11.07	□□□□□ -0.64
ABR-223	ENST00000573895	OR8G2P	Q6IF36	304 aa		11.07	□□□□□ -0.64
ABR-223	ENST00000573895	MS4A10	Q96PG2	267 aa		11.07	□□□□□ -0.64
ABR-223	ENST00000573895	FANCD2OS	Q96PS1	177 aa		11.07	□□□□□ -0.64
ABR-223	ENST00000573895	OR5B12	Q96R08	314 aa		11.07	□□□□□ -0.64
ABR-223	ENST00000573895	IGLV11-55	A0A075B6I3	123 aa		11.06	□□□□□ -0.64
ABR-223	ENST00000573895	TRBV9	A0A0B4J1U6	114 aa		11.06	□□□□□ -0.64
ABR-223	ENST00000573895	KANTR	A0A1W2PQU2	76 aa		11.06	□□□□□ -0.64
ABR-223	ENST00000573895	SEC14L6	B5MCN3	397 aa		11.06	□□□□□ -0.64
ABR-223	ENST00000573895	PRSS46	E5RG02	174 aa		11.06	□□□□□ -0.64
ABR-223	ENST00000573895	MFAP2	P55001	183 aa		11.06	□□□□□ -0.64
ABR-223	ENST00000573895	CD69	Q07108	199 aa		11.06	□□□□□ -0.64
ABR-223	ENST00000573895	SLC38A11	Q08AI6	406 aa		11.06	□□□□□ -0.64
ABR-223	ENST00000573895	ARL16	Q0P5N6	197 aa		11.06	□□□□□ -0.64
ABR-223	ENST00000573895	LAMTOR1	Q6IAA8	161 aa		11.06	□□□□□ -0.64

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