RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SPSB3Q6PJ21 355 aa12.02□□□□□ -0.49
CHD3-215ENST00000572750 GPHB5Q86YW7 130 aa12.02□□□□□ -0.49
CHD3-215ENST00000572750 UXS1Q8NBZ7 420 aa12.02□□□□□ -0.49
CHD3-215ENST00000572750 CACNG8Q8WXS5 425 aa12.02□□□□□ -0.49
CHD3-215ENST00000572750 ATP6V0BQ99437 205 aa12.02□□□□□ -0.49
CHD3-215ENST00000572750 MRPL36Q9P0J6 103 aaKnown RBP12.02□□□□□ -0.49
CHD3-215ENST00000572750 IGHV3OR16-8A0A075B7F1 116 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 WI2-2373I1.2A0A1W2PRP0 233 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 TMEM213A2RRL7 107 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 C2orf70A6NJV1 201 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 A8MWP6 167 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 LGALS9O00182 355 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 CTSGP08311 255 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 FCGR2BP31994 310 aaPredicted RBP12.01□□□□□ -0.49
CHD3-215ENST00000572750 MLANAQ16655 118 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 IAH1Q2TAA2 248 aaPredicted RBP12.01□□□□□ -0.49
CHD3-215ENST00000572750 FAM106AQ4KMX7 169 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 ADAMTSL5Q6ZMM2 481 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 DUSP18Q8NEJ0 188 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 TMEM190Q8WZ59 177 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 ZNF414Q96IQ9 312 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 OR10C1Q96KK4 312 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 PRR25Q96S07 402 aa12.01□□□□□ -0.49
CHD3-215ENST00000572750 ZNF436Q9C0F3 470 aaPredicted RBP12.01□□□□□ -0.49
CHD3-215ENST00000572750 K7EIL1 84 aa12□□□□□ -0.49
CHD3-215ENST00000572750 NUPL2O15504 423 aaKnown RBP12□□□□□ -0.49
CHD3-215ENST00000572750 GNG7O60262 68 aa12□□□□□ -0.49
CHD3-215ENST00000572750 LY86O95711 162 aa12□□□□□ -0.49
CHD3-215ENST00000572750 IGLV1-51P01701 117 aa12□□□□□ -0.49
CHD3-215ENST00000572750 C12orf45Q8N5I9 185 aaPredicted RBP12□□□□□ -0.49
CHD3-215ENST00000572750 OR4D5Q8NGN0 318 aa12□□□□□ -0.49
CHD3-215ENST00000572750 RNASEH2CQ8TDP1 164 aaKnown RBP12□□□□□ -0.49
CHD3-215ENST00000572750 TXN2Q99757 166 aa12□□□□□ -0.49
CHD3-215ENST00000572750 GAR1Q9NY12 217 aaKnown RBP12□□□□□ -0.49
CHD3-215ENST00000572750 ZNF256Q9Y2P7 627 aaPredicted RBP12□□□□□ -0.49
CHD3-215ENST00000572750 SELENOKQ9Y6D0 94 aa12□□□□□ -0.49
CHD3-215ENST00000572750 U3KQ87 197 aa12□□□□□ -0.49
CHD3-215ENST00000572750 FAM25EA8MYX2 175 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 H3BP45 60 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 WRBO00258 174 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 SYNGR2O43760 224 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 SSSCA1O60232 199 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 MED6O75586 246 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 SCGB1D2O95969 90 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 FOLR2P14207 255 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 SPNP16150 400 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 NKX2-1P43699 371 aaPredicted RBP11.99□□□□□ -0.49
CHD3-215ENST00000572750 NPBWR1P48145 328 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 POLR2GP62487 172 aaKnown RBP eCLIP11.99□□□□□ -0.49
CHD3-215ENST00000572750 TM4SF20Q53R12 229 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 MRAPQ8TCY5 172 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 DYNLRB2Q8TF09 96 aa11.99□□□□□ -0.49
CHD3-215ENST00000572750 RPS10-NUDT3A0A1W2PQS6 291 aa11.98□□□□□ -0.49
CHD3-215ENST00000572750 C15orf62A8K5M9 175 aa11.98□□□□□ -0.49
CHD3-215ENST00000572750 INMT-MINDY4F8WBC2 141 aa11.98□□□□□ -0.49
CHD3-215ENST00000572750 ZNF207O43670 478 aaKnown RBP11.98□□□□□ -0.49
CHD3-215ENST00000572750 IL5P05113 134 aa11.98□□□□□ -0.49
CHD3-215ENST00000572750 RND2P52198 227 aa11.98□□□□□ -0.49
CHD3-215ENST00000572750 RELQ04864 619 aaPredicted RBP11.98□□□□□ -0.49
CHD3-215ENST00000572750 SLC16A13Q7RTY0 426 aa11.98□□□□□ -0.49
CHD3-215ENST00000572750 ZBTB8BQ8NAP8 495 aaPredicted RBP11.98□□□□□ -0.49
CHD3-215ENST00000572750 C20orf24Q9BUV8 137 aa11.98□□□□□ -0.49
CHD3-215ENST00000572750 SIGLEC8Q9NYZ4 499 aa11.98□□□□□ -0.49
CHD3-215ENST00000572750 GSKIPQ9P0R6 139 aa11.98□□□□□ -0.49
CHD3-215ENST00000572750 ZMAT5Q9UDW3 170 aaKnown RBP11.98□□□□□ -0.49
CHD3-215ENST00000572750 PAIP2BQ9ULR5 123 aaKnown RBP11.98□□□□□ -0.49
CHD3-215ENST00000572750 NDUFA4O00483 81 aa11.97□□□□□ -0.49
CHD3-215ENST00000572750 IFNA4P05014 189 aa11.97□□□□□ -0.49
CHD3-215ENST00000572750 CBLN1P23435 193 aa11.97□□□□□ -0.49
CHD3-215ENST00000572750 ID3Q02535 119 aa11.97□□□□□ -0.49
CHD3-215ENST00000572750 PRSS54Q6PEW0 395 aa11.97□□□□□ -0.49
CHD3-215ENST00000572750 NOXA1Q86UR1 476 aa11.97□□□□□ -0.49
CHD3-215ENST00000572750 OR4X1Q8NH49 305 aa11.97□□□□□ -0.49
CHD3-215ENST00000572750 ACY3Q96HD9 319 aa11.97□□□□□ -0.49
CHD3-215ENST00000572750 CIB3Q96Q77 187 aaPredicted RBP11.97□□□□□ -0.49
CHD3-215ENST00000572750 MARVELD1Q9BSK0 173 aa11.97□□□□□ -0.49
CHD3-215ENST00000572750 PALMDQ9NP74 551 aa11.97□□□□□ -0.49
CHD3-215ENST00000572750 UFC1Q9Y3C8 167 aa11.97□□□□□ -0.49
CHD3-215ENST00000572750 IZUMO1RA6ND01 250 aa11.96□□□□□ -0.49
CHD3-215ENST00000572750 C5orf51A6NDU8 294 aa11.96□□□□□ -0.49
CHD3-215ENST00000572750 CLN5O75503 358 aa11.96□□□□□ -0.49
CHD3-215ENST00000572750 YIF1AO95070 293 aa11.96□□□□□ -0.49
CHD3-215ENST00000572750 GP9P14770 177 aa11.96□□□□□ -0.49
CHD3-215ENST00000572750 CD69Q07108 199 aa11.96□□□□□ -0.49
CHD3-215ENST00000572750 CD300EQ496F6 205 aaPredicted RBP11.96□□□□□ -0.49
CHD3-215ENST00000572750 GPN1Q9HCN4 374 aaPredicted RBP11.96□□□□□ -0.49
CHD3-215ENST00000572750 DAZ1Q9NQZ3 744 aaKnown RBP11.96□□□□□ -0.49
CHD3-215ENST00000572750 MLXQ9UH92 298 aa11.96□□□□□ -0.49
CHD3-215ENST00000572750 RCL1Q9Y2P8 373 aaKnown RBP11.96□□□□□ -0.49
CHD3-215ENST00000572750 SORL1Q92673 2214 aa11.96□□□□□ -0.49
CHD3-215ENST00000572750 PRAF2O60831 178 aa11.95□□□□□ -0.5
CHD3-215ENST00000572750 TMEM50AO95807 157 aa11.95□□□□□ -0.5
CHD3-215ENST00000572750 MBPP02686 304 aaPredicted RBP11.95□□□□□ -0.5
CHD3-215ENST00000572750 SLC25A4P12235 298 aa11.95□□□□□ -0.5
CHD3-215ENST00000572750 TIGITQ495A1 244 aa11.95□□□□□ -0.5
CHD3-215ENST00000572750 SPANXN5Q5MJ07 72 aa11.95□□□□□ -0.5
CHD3-215ENST00000572750 BTNL8Q6UX41 500 aa11.95□□□□□ -0.5
CHD3-215ENST00000572750 DNAH1Q9P2D7 4330 aa11.95□□□□□ -0.5
CHD3-215ENST00000572750 PTTG1O95997 202 aa11.94□□□□□ -0.5
CHD3-215ENST00000572750 IGKV1-17P01599 117 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms