RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 SUB1P53999 127 aaKnown RBP eCLIP9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 FAM90A2PQ658T7 463 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 ZNF600Q6ZNG1 722 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 Q6ZWC4 215 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 SELENOHQ8IZQ5 122 aaKnown RBP9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 GLYATL2Q8WU03 294 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 SMIM4Q8WVI0 70 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 GPR146Q96CH1 333 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 RNF183Q96D59 192 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 GALNT14Q96FL9 552 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 GINS3Q9BRX5 216 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 C6orf62Q9GZU0 229 aaPredicted RBP9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 TMEM222Q9H0R3 208 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 NAA60Q9H7X0 242 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 ZFAND3Q9H8U3 227 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 MAP6D1Q9H9H5 199 aa9.02□□□□□ -0.97
GTF3C1-208ENST00000567843 DNASE2O00115 360 aaPredicted RBP9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 CDS2O95674 445 aa9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 AKAIN1P0CW23 69 aa9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 TIGITQ495A1 244 aa9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 TMEM268Q5VZI3 342 aa9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 LEMD1Q68G75 181 aa9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 FAM24BQ8N5W8 94 aa9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 OR51S1Q8NGJ8 323 aa9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 DYNC2LI1Q8TCX1 351 aa9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 MS4A6AQ9H2W1 248 aa9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 HEYLQ9NQ87 328 aaPredicted RBP9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 CACNG5Q9UF02 275 aa9.01□□□□□ -0.97
GTF3C1-208ENST00000567843 KIR2DL5BA0A0G2JN68 375 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 KIR2DL5BA0A0G2JPC4 375 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 CEBPZOSA8MTT3 80 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 INS-IGF2F8WCM5 200 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 UBE2CO00762 179 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 CLN5O75503 358 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 DEFB131AP59861 70 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 MRPS10P82664 201 aaKnown RBP9□□□□□ -0.97
GTF3C1-208ENST00000567843 TNFRSF9Q07011 255 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 PVRIGQ6DKI7 326 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 KIR2DL5AQ8N109 375 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 KIR2DL5BQ8NHK3 375 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 TMEM230Q96A57 120 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 CSTL1Q9H114 145 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 CTNNBIP1Q9NSA3 81 aaPredicted RBP9□□□□□ -0.97
GTF3C1-208ENST00000567843 RABAC1Q9UI14 185 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 GPR132Q9UNW8 380 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 TP53TG1Q9Y2A0 90 aa9□□□□□ -0.97
GTF3C1-208ENST00000567843 MPTX1A8MV57 137 aa8.99□□□□□ -0.97
GTF3C1-208ENST00000567843 SPCS3P61009 180 aa8.99□□□□□ -0.97
GTF3C1-208ENST00000567843 PAFAH1B2P68402 229 aa8.99□□□□□ -0.97
GTF3C1-208ENST00000567843 SSBP1Q04837 148 aaKnown RBP8.99□□□□□ -0.97
GTF3C1-208ENST00000567843 OR4X1Q8NH49 305 aa8.99□□□□□ -0.97
GTF3C1-208ENST00000567843 RAB2BQ8WUD1 216 aa8.99□□□□□ -0.97
GTF3C1-208ENST00000567843 RBPMSQ93062 196 aaKnown RBP8.99□□□□□ -0.97
GTF3C1-208ENST00000567843 VSIRQ9H7M9 311 aa8.99□□□□□ -0.97
GTF3C1-208ENST00000567843 MCUBQ9NWR8 336 aa8.99□□□□□ -0.97
GTF3C1-208ENST00000567843 CCDC59Q9P031 241 aaKnown RBP8.99□□□□□ -0.97
GTF3C1-208ENST00000567843 CRYM-AS1A6NIL9 109 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 CORTO00230 105 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 DEFB4AO15263 64 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 IGKV1-17P01599 117 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 AKR1C4P17516 323 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 NPPCP23582 126 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 TNFSF8P32971 234 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 RND2P52198 227 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 DHODHQ02127 395 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 RBMS2Q15434 407 aaKnown RBP8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 BSXQ3C1V8 233 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 STXBP6Q8NFX7 210 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 TMEM170AQ8WVE7 144 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 PRRT1Q99946 306 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 RARRES2Q99969 163 aa8.98□□□□□ -0.97
GTF3C1-208ENST00000567843 ANKRD20A5PA0PJZ0 165 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 FABP12A6NFH5 140 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 H3BMQ9 156 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 CTDSPLO15194 276 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 B3GALNT1O75752 331 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 LY6G6CO95867 125 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 CA1P00915 261 aaPredicted RBP8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 HTR2BP41595 481 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 P2RY1P47900 373 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 TMBIM6P55061 237 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 CMC4P56277 68 aaPredicted RBP8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 TMEM187Q14656 261 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 SURF2Q15527 256 aaPredicted RBP8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 PRSS54Q6PEW0 395 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 LYZL2Q7Z4W2 148 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 FAM219AQ8IW50 185 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 SLC24A4Q8NFF2 622 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 OR52E5Q8NH55 327 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 MCFD2Q8NI22 146 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 ACY3Q96HD9 319 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 METTL26Q96S19 204 aa8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 SLIRPQ9GZT3 109 aaKnown RBP8.97□□□□□ -0.97
GTF3C1-208ENST00000567843 KNCNA6PVL3 124 aa8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 GSTZ1O43708 216 aaPredicted RBP8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 NOL3O60936 208 aaKnown RBP8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 ZNF688P0C7X2 276 aa8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 IGLC1P0CG04 106 aa8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 RPL5P46777 297 aaKnown RBP8.96□□□□□ -0.98
GTF3C1-208ENST00000567843 AARDQ4LEZ3 155 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms