RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TRAV14DV4A0A0A6YYC5 116 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 IGHV7-4-1A0A0J9YVY3 117 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 TEX13DA0A0J9YY54 714 aaPredicted RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 ANKRD20A5PA0PJZ0 165 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 OR4C46A6NHA9 309 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 H3BMQ9 156 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 ZNF207O43670 478 aaKnown RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 GSTZ1O43708 216 aaPredicted RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 GNG7O60262 68 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 YIF1AO95070 293 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 CDS2O95674 445 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 CD5P06127 495 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 H2AFB1P0C5Y9 115 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 H2AFB2P0C5Z0 115 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 OR5AC1P0C628 307 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 RPL5P46777 297 aaKnown RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 NPBWR1P48145 328 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 HOXA1P49639 335 aaPredicted RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 DHODHQ02127 395 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 SP6Q3SY56 376 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 AARDQ4LEZ3 155 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 SPINK9Q5DT21 86 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 PVRIGQ6DKI7 326 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 FAAP20Q6NZ36 180 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 FAM219AQ8IW50 185 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 TMEM116Q8NCL8 245 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 DUSP18Q8NEJ0 188 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 OR4C16Q8NGL9 310 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 RNASE11Q8TAA1 199 aaKnown RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 IL17DQ8TAD2 202 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 RBPMSQ93062 196 aaKnown RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 PINX1Q96BK5 328 aaKnown RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 ZNF414Q96IQ9 312 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 FAM110AQ9BQ89 295 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 RTBDNQ9BSG5 229 aaPredicted RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 GGTLC1Q9BX51 225 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 SLIRPQ9GZT3 109 aaKnown RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 C6orf62Q9GZU0 229 aaPredicted RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 TMEM222Q9H0R3 208 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 NAA60Q9H7X0 242 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 RETNQ9HD89 108 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 ENY2Q9NPA8 101 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 CACFD1Q9UGQ2 172 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 RSL24D1Q9UHA3 163 aaKnown RBP3.57□□□□□ -1.84
CLK3-219ENST00000567805 SMPXQ9UHP9 88 aa3.57□□□□□ -1.84
CLK3-219ENST00000567805 A0A0G2JRQ6 117 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 FABP12A6NFH5 140 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 CRYM-AS1A6NIL9 109 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 CHEK1O14757 476 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 SCGB2A1O75556 95 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 IGHV3-48P01763 117 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 RNASE2P10153 161 aaKnown RBP3.56□□□□□ -1.84
CLK3-219ENST00000567805 TNFSF8P32971 234 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 BMI1P35226 326 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 OPRK1P41145 380 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 ETV6P41212 452 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 HTR2BP41595 481 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 APOC4P55056 127 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 CMC4P56277 68 aaPredicted RBP3.56□□□□□ -1.84
CLK3-219ENST00000567805 SPCS3P61009 180 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 PAFAH1B2P68402 229 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 BSXQ3C1V8 233 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 ODF3L2Q3SX64 289 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 ZFAND6Q6FIF0 208 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 TOMM20LQ6UXN7 152 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 ZNF600Q6ZNG1 722 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 Q6ZRM9 215 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 Q6ZWC4 215 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 SELENOHQ8IZQ5 122 aaKnown RBP3.56□□□□□ -1.84
CLK3-219ENST00000567805 OR51S1Q8NGJ8 323 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 OR4X1Q8NH49 305 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 OR52E5Q8NH55 327 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 MCFD2Q8NI22 146 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 LHFPL5Q8TAF8 219 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 GLYATL2Q8WU03 294 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 GALNT14Q96FL9 552 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 SCGB3A2Q96PL1 93 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 RNF2Q99496 336 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 SOSTQ9BQB4 213 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 GINS3Q9BRX5 216 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 RHPN1-AS1Q9BWJ2 59 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.56□□□□□ -1.84
CLK3-219ENST00000567805 UBQLN2Q9UHD9 624 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 SCP2D1Q9UJQ7 156 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 GPR132Q9UNW8 380 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 TP53TG1Q9Y2A0 90 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 KCNIP3Q9Y2W7 256 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 TMEM56-RWDD3S4R434 201 aa3.56□□□□□ -1.84
CLK3-219ENST00000567805 PLECQ15149 4684 aaKnown RBP3.55□□□□□ -1.84
CLK3-219ENST00000567805 HYDINQ4G0P3 5121 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 TRAV30A0A087WSZ9 112 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 IGHV3-49A0A0A0MS15 119 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 PIGBOS1A0A0B4J2F0 54 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 KIR2DL5BA0A0G2JN68 375 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 KIR2DL5BA0A0G2JPC4 375 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 RPS10-NUDT3A0A1W2PQS6 291 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 UBE2CO00762 179 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 CLN5O75503 358 aa3.55□□□□□ -1.84
CLK3-219ENST00000567805 TMEM50AO95807 157 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms