RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 IAH1Q2TAA2 248 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-220ENST00000567720 SPSB3Q6PJ21 355 aa13.09□□□□□ -0.31
COMMD4-220ENST00000567720 C12orf45Q8N5I9 185 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-220ENST00000567720 ZBTB8BQ8NAP8 495 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-220ENST00000567720 TMEM190Q8WZ59 177 aa13.09□□□□□ -0.31
COMMD4-220ENST00000567720 OR4C12Q96R67 309 aa13.09□□□□□ -0.31
COMMD4-220ENST00000567720 ELOVL1Q9BW60 279 aa13.09□□□□□ -0.31
COMMD4-220ENST00000567720 PEMTQ9UBM1 199 aa13.09□□□□□ -0.31
COMMD4-220ENST00000567720 C2orf70A6NJV1 201 aa13.08□□□□□ -0.32
COMMD4-220ENST00000567720 C15orf62A8K5M9 175 aa13.08□□□□□ -0.32
COMMD4-220ENST00000567720 INMT-MINDY4F8WBC2 141 aa13.08□□□□□ -0.32
COMMD4-220ENST00000567720 IGLV1-51P01701 117 aa13.08□□□□□ -0.32
COMMD4-220ENST00000567720 MLANAQ16655 118 aa13.08□□□□□ -0.32
COMMD4-220ENST00000567720 TATDN3Q17R31 274 aa13.08□□□□□ -0.32
COMMD4-220ENST00000567720 UXS1Q8NBZ7 420 aa13.08□□□□□ -0.32
COMMD4-220ENST00000567720 RNASEH2CQ8TDP1 164 aaKnown RBP13.08□□□□□ -0.32
COMMD4-220ENST00000567720 CACNG8Q8WXS5 425 aa13.08□□□□□ -0.32
COMMD4-220ENST00000567720 TXN2Q99757 166 aa13.08□□□□□ -0.32
COMMD4-220ENST00000567720 MARVELD1Q9BSK0 173 aa13.08□□□□□ -0.32
COMMD4-220ENST00000567720 U3KQ87 197 aa13.08□□□□□ -0.32
COMMD4-220ENST00000567720 GNG7O60262 68 aa13.07□□□□□ -0.32
COMMD4-220ENST00000567720 MED6O75586 246 aa13.07□□□□□ -0.32
COMMD4-220ENST00000567720 NKX2-1P43699 371 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-220ENST00000567720 POLR2GP62487 172 aaKnown RBP eCLIP13.07□□□□□ -0.32
COMMD4-220ENST00000567720 ID3Q02535 119 aa13.07□□□□□ -0.32
COMMD4-220ENST00000567720 GAR1Q9NY12 217 aaKnown RBP13.07□□□□□ -0.32
COMMD4-220ENST00000567720 SIGLEC8Q9NYZ4 499 aa13.07□□□□□ -0.32
COMMD4-220ENST00000567720 RCL1Q9Y2P8 373 aaKnown RBP13.07□□□□□ -0.32
COMMD4-220ENST00000567720 WI2-2373I1.2A0A1W2PRP0 233 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 ZNF320A2RRD8 509 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 H3BP45 60 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 WRBO00258 174 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 NUPL2O15504 423 aaKnown RBP13.06□□□□□ -0.32
COMMD4-220ENST00000567720 SSSCA1O60232 199 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 PRAF2O60831 178 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 SCGB1D2O95969 90 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 NPBWR1P48145 328 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 FAM106AQ4KMX7 169 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 PRSS54Q6PEW0 395 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 SLC16A13Q7RTY0 426 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 OR4X1Q8NH49 305 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 CIB3Q96Q77 187 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-220ENST00000567720 PRR25Q96S07 402 aa13.06□□□□□ -0.32
COMMD4-220ENST00000567720 IGHV3OR16-8A0A075B7F1 116 aa13.05□□□□□ -0.32
COMMD4-220ENST00000567720 RPS10-NUDT3A0A1W2PQS6 291 aa13.05□□□□□ -0.32
COMMD4-220ENST00000567720 FAM25EA8MYX2 175 aa13.05□□□□□ -0.32
COMMD4-220ENST00000567720 K7EIL1 84 aa13.05□□□□□ -0.32
COMMD4-220ENST00000567720 NDUFA4O00483 81 aa13.05□□□□□ -0.32
COMMD4-220ENST00000567720 PTTG1O95997 202 aa13.05□□□□□ -0.32
COMMD4-220ENST00000567720 RND2P52198 227 aa13.05□□□□□ -0.32
COMMD4-220ENST00000567720 CD69Q07108 199 aa13.05□□□□□ -0.32
COMMD4-220ENST00000567720 TM4SF20Q53R12 229 aa13.05□□□□□ -0.32
COMMD4-220ENST00000567720 NOXA1Q86UR1 476 aa13.05□□□□□ -0.32
COMMD4-220ENST00000567720 GPN1Q9HCN4 374 aaPredicted RBP13.05□□□□□ -0.32
COMMD4-220ENST00000567720 PALMDQ9NP74 551 aa13.05□□□□□ -0.32
COMMD4-220ENST00000567720 SNRPGP15A8MWD9 76 aa13.04□□□□□ -0.32
COMMD4-220ENST00000567720 CLN5O75503 358 aa13.04□□□□□ -0.32
COMMD4-220ENST00000567720 TMEM50AO95807 157 aa13.04□□□□□ -0.32
COMMD4-220ENST00000567720 FOLR2P14207 255 aa13.04□□□□□ -0.32
COMMD4-220ENST00000567720 RELQ04864 619 aaPredicted RBP13.04□□□□□ -0.32
COMMD4-220ENST00000567720 GSKIPQ9P0R6 139 aa13.04□□□□□ -0.32
COMMD4-220ENST00000567720 ZNF256Q9Y2P7 627 aaPredicted RBP13.04□□□□□ -0.32
COMMD4-220ENST00000567720 TGP01266 2768 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 C5orf51A6NDU8 294 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 PRSS46E5RG02 174 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 IGKV1-17P01599 117 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 MBPP02686 304 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-220ENST00000567720 IFNA4P05014 189 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 IGLC1P0CG04 106 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 SLC25A4P12235 298 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 ATP5IP56385 69 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-220ENST00000567720 TMEM116Q8NCL8 245 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 ZFAND3Q9H8U3 227 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 DAZ1Q9NQZ3 744 aaKnown RBP13.03□□□□□ -0.32
COMMD4-220ENST00000567720 UFC1Q9Y3C8 167 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 SELENOKQ9Y6D0 94 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 DNAH9Q9NYC9 4486 aa13.03□□□□□ -0.32
COMMD4-220ENST00000567720 IZUMO1RA6ND01 250 aa13.02□□□□□ -0.33
COMMD4-220ENST00000567720 ZNF207O43670 478 aaKnown RBP13.02□□□□□ -0.33
COMMD4-220ENST00000567720 CBLN1P23435 193 aa13.02□□□□□ -0.33
COMMD4-220ENST00000567720 ELLP55199 621 aaPredicted RBP13.02□□□□□ -0.33
COMMD4-220ENST00000567720 PAX9P55771 341 aa13.02□□□□□ -0.33
COMMD4-220ENST00000567720 SPANXN5Q5MJ07 72 aa13.02□□□□□ -0.33
COMMD4-220ENST00000567720 MRAPQ8TCY5 172 aa13.02□□□□□ -0.33
COMMD4-220ENST00000567720 DYNLRB2Q8TF09 96 aa13.02□□□□□ -0.33
COMMD4-220ENST00000567720 ACY3Q96HD9 319 aa13.02□□□□□ -0.33
COMMD4-220ENST00000567720 C20orf24Q9BUV8 137 aa13.02□□□□□ -0.33
COMMD4-220ENST00000567720 ZMAT5Q9UDW3 170 aaKnown RBP13.02□□□□□ -0.33
COMMD4-220ENST00000567720 MLXQ9UH92 298 aa13.02□□□□□ -0.33
COMMD4-220ENST00000567720 PAIP2BQ9ULR5 123 aaKnown RBP13.02□□□□□ -0.33
COMMD4-220ENST00000567720 C7orf66A4D0T2 115 aa13.01□□□□□ -0.33
COMMD4-220ENST00000567720 K7EPK0 472 aa13.01□□□□□ -0.33
COMMD4-220ENST00000567720 GOSR2O14653 212 aa13.01□□□□□ -0.33
COMMD4-220ENST00000567720 LY86O95711 162 aa13.01□□□□□ -0.33
COMMD4-220ENST00000567720 C8orf88P0DMB2 117 aa13.01□□□□□ -0.33
COMMD4-220ENST00000567720 GP9P14770 177 aa13.01□□□□□ -0.33
COMMD4-220ENST00000567720 RAB11AP62491 216 aa13.01□□□□□ -0.33
COMMD4-220ENST00000567720 TIGITQ495A1 244 aa13.01□□□□□ -0.33
COMMD4-220ENST00000567720 CD300EQ496F6 205 aaPredicted RBP13.01□□□□□ -0.33
COMMD4-220ENST00000567720 ETFRF1Q6IPR1 90 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms