RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ACSM6Q6P461 480 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 DLX4Q92988 240 aaPredicted RBP9.35□□□□□ -0.91
SF3B3-208ENST00000567250 C2orf50Q96LR7 162 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 RAB40CQ96S21 281 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 MAGT1Q9H0U3 335 aa9.35□□□□□ -0.91
SF3B3-208ENST00000567250 ZMAT5Q9UDW3 170 aaKnown RBP9.35□□□□□ -0.91
SF3B3-208ENST00000567250 IGHV3-21A0A0B4J1V1 117 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 OR2T8A6NH00 312 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 SEC14L6B5MCN3 397 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 GOSR2O14653 212 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 IGLL1P15814 213 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 SPNP16150 400 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 PVALBP20472 110 aaPredicted RBP9.34□□□□□ -0.91
SF3B3-208ENST00000567250 POLR2GP62487 172 aaKnown RBP eCLIP9.34□□□□□ -0.91
SF3B3-208ENST00000567250 PRR20EP86478 221 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 PRR20CP86479 221 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 PRR20DP86480 221 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 PRR20BP86481 221 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 PRR20AP86496 221 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 KLF5Q13887 457 aaPredicted RBP9.34□□□□□ -0.91
SF3B3-208ENST00000567250 FAM106AQ4KMX7 169 aa9.34□□□□□ -0.91
SF3B3-208ENST00000567250 PAIP2BQ9ULR5 123 aaKnown RBP9.34□□□□□ -0.91
SF3B3-208ENST00000567250 STRAPQ9Y3F4 350 aaKnown RBP9.34□□□□□ -0.91
SF3B3-208ENST00000567250 TRAV30A0A087WSZ9 112 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 L7N2F9 121 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 LGALS9O00182 355 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 SAP30O75446 220 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 SCAF4O95104 1147 aaKnown RBP9.33□□□□□ -0.92
SF3B3-208ENST00000567250 SYNJ2BPP57105 145 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 TAS2R30P59541 319 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 VAMP2P63027 116 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 CYCSP99999 105 aaKnown RBP9.33□□□□□ -0.92
SF3B3-208ENST00000567250 CD69Q07108 199 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 SPANXN5Q5MJ07 72 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 SAMD5Q5TGI4 173 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 SLC16A13Q7RTY0 426 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 REC114Q7Z4M0 266 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 GPHB5Q86YW7 130 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 OR9G4Q8NGQ1 327 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 OR4X1Q8NH49 305 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 SLC35E1Q96K37 410 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 OR4C12Q96R67 309 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 PSENENQ9NZ42 101 aa9.33□□□□□ -0.92
SF3B3-208ENST00000567250 FBN3Q75N90 2809 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 C15orf62A8K5M9 175 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 A8MWP6 167 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 F8W735 103 aaPredicted RBP9.32□□□□□ -0.92
SF3B3-208ENST00000567250 H3BP45 60 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 NDUFA4O00483 81 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 WIPF1O43516 503 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 TSC22D2O75157 780 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 CLN5O75503 358 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 OR2C1O95371 312 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 MBPP02686 304 aaPredicted RBP9.32□□□□□ -0.92
SF3B3-208ENST00000567250 PET100P0DJ07 73 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 S100A10P60903 97 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 CACNG8Q8WXS5 425 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 SMIM8Q96KF7 97 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 NMES1Q9C002 83 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 FNDC4Q9H6D8 234 aaPredicted RBP9.32□□□□□ -0.92
SF3B3-208ENST00000567250 ZC4H2Q9NQZ6 224 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 MGAT4CQ9UBM8 478 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 RCL1Q9Y2P8 373 aaKnown RBP9.32□□□□□ -0.92
SF3B3-208ENST00000567250 LSM5Q9Y4Y9 91 aaKnown RBP9.32□□□□□ -0.92
SF3B3-208ENST00000567250 ALG5Q9Y673 324 aa9.32□□□□□ -0.92
SF3B3-208ENST00000567250 G3V4G9 280 aa9.31□□□□□ -0.92
SF3B3-208ENST00000567250 K7EPK0 472 aa9.31□□□□□ -0.92
SF3B3-208ENST00000567250 IGHV3-48P01763 117 aa9.31□□□□□ -0.92
SF3B3-208ENST00000567250 GPX4P36969 197 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-208ENST00000567250 RND2P52198 227 aa9.31□□□□□ -0.92
SF3B3-208ENST00000567250 OXA1LQ15070 435 aa9.31□□□□□ -0.92
SF3B3-208ENST00000567250 OXLD1Q5BKU9 147 aa9.31□□□□□ -0.92
SF3B3-208ENST00000567250 C11orf87Q6NUJ2 197 aa9.31□□□□□ -0.92
SF3B3-208ENST00000567250 TMEM116Q8NCL8 245 aa9.31□□□□□ -0.92
SF3B3-208ENST00000567250 TMEM170AQ8WVE7 144 aa9.31□□□□□ -0.92
SF3B3-208ENST00000567250 TMEM190Q8WZ59 177 aa9.31□□□□□ -0.92
SF3B3-208ENST00000567250 ZNF436Q9C0F3 470 aaPredicted RBP9.31□□□□□ -0.92
SF3B3-208ENST00000567250 UFC1Q9Y3C8 167 aa9.31□□□□□ -0.92
SF3B3-208ENST00000567250 ZNF320A2RRD8 509 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 RLN2P04090 185 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 CTSGP08311 255 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 ADMP35318 185 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 ELLP55199 621 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-208ENST00000567250 RAB32Q13637 225 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 PRSS54Q6PEW0 395 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 ZNF600Q6ZNG1 722 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 OR1S2Q8NGQ3 325 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 MARC2Q969Z3 335 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 GINS3Q9BRX5 216 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 CHRDL1Q9BU40 450 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 MED28Q9H204 178 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 SIGLEC8Q9NYZ4 499 aa9.3□□□□□ -0.92
SF3B3-208ENST00000567250 TMEM50AO95807 157 aa9.29□□□□□ -0.92
SF3B3-208ENST00000567250 FABP1P07148 127 aa9.29□□□□□ -0.92
SF3B3-208ENST00000567250 OR10J1P30954 320 aa9.29□□□□□ -0.92
SF3B3-208ENST00000567250 BCAP31P51572 246 aa9.29□□□□□ -0.92
SF3B3-208ENST00000567250 CAV2P51636 162 aa9.29□□□□□ -0.92
SF3B3-208ENST00000567250 KPRPQ5T749 579 aaPredicted RBP9.29□□□□□ -0.92
SF3B3-208ENST00000567250 DYNLRB2Q8TF09 96 aa9.29□□□□□ -0.92
SF3B3-208ENST00000567250 ASB13Q8WXK3 278 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms