RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 RRNAD1Q96FB5 475 aaKnown RBP13.48□□□□□ -0.25
USB1-213ENST00000566292 RTBDNQ9BSG5 229 aaPredicted RBP13.48□□□□□ -0.25
USB1-213ENST00000566292 TMEM222Q9H0R3 208 aa13.48□□□□□ -0.25
USB1-213ENST00000566292 IGHV3-66A0A0C4DH42 116 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 CORTO00230 105 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 B3GALNT1O75752 331 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 DFFBO76075 338 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 CDS2O95674 445 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 OR5AC1P0C628 307 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 SUB1P53999 127 aaKnown RBP eCLIP13.47□□□□□ -0.25
USB1-213ENST00000566292 MRPS10P82664 201 aaKnown RBP13.47□□□□□ -0.25
USB1-213ENST00000566292 BSXQ3C1V8 233 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 GPR141Q7Z602 305 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 RNASE11Q8TAA1 199 aaKnown RBP13.47□□□□□ -0.25
USB1-213ENST00000566292 GLYATL2Q8WU03 294 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 SMIM4Q8WVI0 70 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 LINC00476Q8WZB0 136 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 C6orf62Q9GZU0 229 aaPredicted RBP13.47□□□□□ -0.25
USB1-213ENST00000566292 CSTL1Q9H114 145 aa13.47□□□□□ -0.25
USB1-213ENST00000566292 NUPR2A6NF83 97 aa13.46□□□□□ -0.25
USB1-213ENST00000566292 CD5P06127 495 aa13.46□□□□□ -0.25
USB1-213ENST00000566292 ATF4P18848 351 aaPredicted RBP13.46□□□□□ -0.25
USB1-213ENST00000566292 MEF2DQ14814 521 aa13.46□□□□□ -0.25
USB1-213ENST00000566292 AARDQ4LEZ3 155 aa13.46□□□□□ -0.25
USB1-213ENST00000566292 MS4A6AQ9H2W1 248 aa13.46□□□□□ -0.25
USB1-213ENST00000566292 NAA60Q9H7X0 242 aa13.46□□□□□ -0.25
USB1-213ENST00000566292 ENY2Q9NPA8 101 aa13.46□□□□□ -0.25
USB1-213ENST00000566292 C14orf166Q9Y224 244 aaKnown RBP13.46□□□□□ -0.25
USB1-213ENST00000566292 AGRNO00468 2067 aa13.46□□□□□ -0.26
USB1-213ENST00000566292 TEX13DA0A0J9YY54 714 aaPredicted RBP13.45□□□□□ -0.26
USB1-213ENST00000566292 MPTX1A8MV57 137 aa13.45□□□□□ -0.26
USB1-213ENST00000566292 CLN5O75503 358 aa13.45□□□□□ -0.26
USB1-213ENST00000566292 OPRK1P41145 380 aa13.45□□□□□ -0.26
USB1-213ENST00000566292 RPL5P46777 297 aaKnown RBP13.45□□□□□ -0.26
USB1-213ENST00000566292 SPCS3P61009 180 aa13.45□□□□□ -0.26
USB1-213ENST00000566292 PAFAH1B2P68402 229 aa13.45□□□□□ -0.26
USB1-213ENST00000566292 CEMP1Q6PRD7 247 aaPredicted RBP13.45□□□□□ -0.26
USB1-213ENST00000566292 FAM219AQ8IW50 185 aa13.45□□□□□ -0.26
USB1-213ENST00000566292 SELENOHQ8IZQ5 122 aaKnown RBP13.45□□□□□ -0.26
USB1-213ENST00000566292 FAM24BQ8N5W8 94 aa13.45□□□□□ -0.26
USB1-213ENST00000566292 OR4C16Q8NGL9 310 aa13.45□□□□□ -0.26
USB1-213ENST00000566292 OR4X1Q8NH49 305 aa13.45□□□□□ -0.26
USB1-213ENST00000566292 DISC1C4P0D8 188 aa13.44□□□□□ -0.26
USB1-213ENST00000566292 SURF2Q15527 256 aaPredicted RBP13.44□□□□□ -0.26
USB1-213ENST00000566292 OR52E5Q8NH55 327 aa13.44□□□□□ -0.26
USB1-213ENST00000566292 RBPMSQ93062 196 aaKnown RBP13.44□□□□□ -0.26
USB1-213ENST00000566292 GPR146Q96CH1 333 aa13.44□□□□□ -0.26
USB1-213ENST00000566292 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.44□□□□□ -0.26
USB1-213ENST00000566292 GPR132Q9UNW8 380 aa13.44□□□□□ -0.26
USB1-213ENST00000566292 CRYM-AS1A6NIL9 109 aa13.43□□□□□ -0.26
USB1-213ENST00000566292 DNASE2O00115 360 aaPredicted RBP13.43□□□□□ -0.26
USB1-213ENST00000566292 CTDSPLO15194 276 aa13.43□□□□□ -0.26
USB1-213ENST00000566292 IGKV1-17P01599 117 aa13.43□□□□□ -0.26
USB1-213ENST00000566292 AKAIN1P0CW23 69 aa13.43□□□□□ -0.26
USB1-213ENST00000566292 NPPCP23582 126 aa13.43□□□□□ -0.26
USB1-213ENST00000566292 DEFB131AP59861 70 aa13.43□□□□□ -0.26
USB1-213ENST00000566292 IL18Q14116 193 aa13.43□□□□□ -0.26
USB1-213ENST00000566292 LEMD1Q68G75 181 aa13.43□□□□□ -0.26
USB1-213ENST00000566292 CLVS1Q8IUQ0 354 aaPredicted RBP13.43□□□□□ -0.26
USB1-213ENST00000566292 GATAD1Q8WUU5 269 aa13.43□□□□□ -0.26
USB1-213ENST00000566292 DIRAS2Q96HU8 199 aa13.43□□□□□ -0.26
USB1-213ENST00000566292 CACNG5Q9UF02 275 aa13.43□□□□□ -0.26
USB1-213ENST00000566292 KMT2AQ03164 3969 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 TRAV2A0A0B4J234 112 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 LY6G6CO95867 125 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 CRYBB3P26998 211 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 HTR2BP41595 481 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 RPL11P62913 178 aaKnown RBP13.42□□□□□ -0.26
USB1-213ENST00000566292 DHODHQ02127 395 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 TIGITQ495A1 244 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 TMEM268Q5VZI3 342 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 TMEM217Q8N7C4 229 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 DYNC2LI1Q8TCX1 351 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 RARRES2Q99969 163 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 TMEM231Q9H6L2 316 aa13.42□□□□□ -0.26
USB1-213ENST00000566292 CCDC59Q9P031 241 aaKnown RBP13.42□□□□□ -0.26
USB1-213ENST00000566292 C2orf83Q53S99 150 aa13.41□□□□□ -0.26
USB1-213ENST00000566292 OR51S1Q8NGJ8 323 aa13.41□□□□□ -0.26
USB1-213ENST00000566292 TMEM170AQ8WVE7 144 aa13.41□□□□□ -0.26
USB1-213ENST00000566292 TMEM230Q96A57 120 aa13.41□□□□□ -0.26
USB1-213ENST00000566292 METTL26Q96S19 204 aa13.41□□□□□ -0.26
USB1-213ENST00000566292 HEYLQ9NQ87 328 aaPredicted RBP13.41□□□□□ -0.26
USB1-213ENST00000566292 RABAC1Q9UI14 185 aa13.41□□□□□ -0.26
USB1-213ENST00000566292 TMEM56-RWDD3S4R434 201 aa13.41□□□□□ -0.26
USB1-213ENST00000566292 A0A1W2PS18 150 aa13.4□□□□□ -0.26
USB1-213ENST00000566292 ANKRD20A5PA0PJZ0 165 aa13.4□□□□□ -0.26
USB1-213ENST00000566292 CA1P00915 261 aaPredicted RBP13.4□□□□□ -0.26
USB1-213ENST00000566292 P2RY1P47900 373 aa13.4□□□□□ -0.26
USB1-213ENST00000566292 PRSS54Q6PEW0 395 aa13.4□□□□□ -0.26
USB1-213ENST00000566292 OR11H2Q8NH07 326 aa13.4□□□□□ -0.26
USB1-213ENST00000566292 RAB2BQ8WUD1 216 aa13.4□□□□□ -0.26
USB1-213ENST00000566292 PRRT1Q99946 306 aa13.4□□□□□ -0.26
USB1-213ENST00000566292 PRR13Q9NZ81 148 aa13.4□□□□□ -0.26
USB1-213ENST00000566292 TRAV30A0A087WSZ9 112 aa13.39□□□□□ -0.27
USB1-213ENST00000566292 RPS10-NUDT3A0A1W2PQS6 291 aa13.39□□□□□ -0.27
USB1-213ENST00000566292 K7EQG2 157 aa13.39□□□□□ -0.27
USB1-213ENST00000566292 GSTZ1O43708 216 aaPredicted RBP13.39□□□□□ -0.27
USB1-213ENST00000566292 NXPH3O95157 252 aa13.39□□□□□ -0.27
USB1-213ENST00000566292 IGLC1P0CG04 106 aa13.39□□□□□ -0.27
USB1-213ENST00000566292 RND2P52198 227 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms