RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 SPCS1Q9Y6A9 102 aa11.34□□□□□ -0.59
CX3CL1-204ENST00000565912 ZNF646O15015 1829 aaPredicted RBP11.34□□□□□ -0.59
CX3CL1-204ENST00000565912 IGKV1D-13A0A0B4J2D9 117 aa11.33□□□□□ -0.59
CX3CL1-204ENST00000565912 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.59
CX3CL1-204ENST00000565912 IGKV1-13P0DP09 117 aa11.33□□□□□ -0.59
CX3CL1-204ENST00000565912 OR9G4Q8NGQ1 327 aa11.33□□□□□ -0.59
CX3CL1-204ENST00000565912 A0A0U1RRA0 63 aa11.33□□□□□ -0.6
CX3CL1-204ENST00000565912 WNT2P09544 360 aa11.33□□□□□ -0.6
CX3CL1-204ENST00000565912 RAMP3O60896 148 aa11.33□□□□□ -0.6
CX3CL1-204ENST00000565912 PAX2Q02962 417 aa11.33□□□□□ -0.6
CX3CL1-204ENST00000565912 CD28P10747 220 aa11.33□□□□□ -0.6
CX3CL1-204ENST00000565912 MTURNQ8N3F0 131 aa11.33□□□□□ -0.6
CX3CL1-204ENST00000565912 IGHV1-18A0A0C4DH31 117 aa11.33□□□□□ -0.6
CX3CL1-204ENST00000565912 GHRHP01286 108 aa11.33□□□□□ -0.6
CX3CL1-204ENST00000565912 SEPSECSQ9HD40 501 aaKnown RBP11.33□□□□□ -0.6
CX3CL1-204ENST00000565912 EPDR1Q9UM22 224 aa11.33□□□□□ -0.6
CX3CL1-204ENST00000565912 CD55P08174 381 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 OR9G9P0C7N8 305 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 SRSF1Q07955 248 aaKnown RBP eCLIP11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 PSMG4Q5JS54 123 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 SPACA3Q8IXA5 215 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 LINC00518Q8N0U6 118 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 DEPPQ9NTK1 212 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 PSG8Q9UQ74 426 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 EVI2AP22794 236 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 PAX8Q06710 450 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 DTX2Q86UW9 622 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 RNF182Q8N6D2 247 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 VWCEQ96DN2 955 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 AHCTF1Q8WYP5 2266 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 SAP30O75446 220 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 ZNF497Q6ZNH5 498 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 COQ2Q96H96 371 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 SPRR3Q9UBC9 169 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 SLC25A15Q9Y619 301 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 TET1Q8NFU7 2136 aa11.32□□□□□ -0.6
CX3CL1-204ENST00000565912 TRGV11A0A075B6L2 103 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 TRAV2A0A0B4J234 112 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 ADARB2-AS1A8MUL3 147 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 CA1P00915 261 aaPredicted RBP11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 ZNF688P0C7X2 276 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 IGLV3-19P01714 112 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 CSRP1P21291 193 aaKnown RBP11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 RPL23P62829 140 aaKnown RBP11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 CYSLTR1Q9Y271 337 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 E9PLN8 166 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 LINC00114Q6XXX2 140 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 C1QTNF9P0C862 333 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 TDGF1P3P51864 188 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 LHFPL4Q7Z7J7 247 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 PHLDA1Q8WV24 401 aaPredicted RBP11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 C18orf12Q96KH6 178 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 DEFB121Q5J5C9 76 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 LYZL4Q96KX0 146 aa11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 C11orf68Q9H3H3 251 aaKnown RBP11.31□□□□□ -0.6
CX3CL1-204ENST00000565912 CCL20P78556 96 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 CRIPAKQ8N1N5 446 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 PRDM13Q9H4Q3 707 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 IGHV3-64A0A075B6Q5 118 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 TRAV9-1A0A075B6T8 112 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 SERF1AO75920 110 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 TRAV8-2A0A0B4J237 113 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 PINLYPA6NC86 204 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 IGFBP3P17936 291 aaPredicted RBP11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 NIT1Q86X76 327 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 TRAV41A0A0B4J266 112 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 PGPEP1LA6NFU8 196 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 IGHV1-46P01743 117 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 ERVK11-1P61568 191 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 SIGLEC15Q6ZMC9 328 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 FAM89BQ8N5H3 189 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 CARHSP1Q9Y2V2 147 aaKnown RBP11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 PSME4Q14997 1843 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 H3BUT2 72 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 NRN1Q9NPD7 142 aa11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 NHP2Q9NX24 153 aaKnown RBP11.3□□□□□ -0.6
CX3CL1-204ENST00000565912 LINC00271P0C7V0 271 aa11.29□□□□□ -0.6
CX3CL1-204ENST00000565912 TMEM219Q86XT9 240 aa11.29□□□□□ -0.6
CX3CL1-204ENST00000565912 CSRP3P50461 194 aa11.29□□□□□ -0.6
CX3CL1-204ENST00000565912 MYOFQ9NZM1 2061 aa11.29□□□□□ -0.6
CX3CL1-204ENST00000565912 ADMP35318 185 aa11.29□□□□□ -0.6
CX3CL1-204ENST00000565912 RNF222A6NCQ9 220 aa11.29□□□□□ -0.6
CX3CL1-204ENST00000565912 HBDP02042 147 aa11.29□□□□□ -0.6
CX3CL1-204ENST00000565912 LINC00158P58513 81 aa11.29□□□□□ -0.6
CX3CL1-204ENST00000565912 CYB5R2Q6BCY4 276 aa11.29□□□□□ -0.6
CX3CL1-204ENST00000565912 CHTOPQ9Y3Y2 248 aaKnown RBP11.29□□□□□ -0.6
CX3CL1-204ENST00000565912 DPM2O94777 84 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 PRCDQ00LT1 54 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 FOXF2Q12947 444 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 OR10W1Q8NGF6 305 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 IGLV3-12A0A075B6K2 115 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 LOC102723996A0A087X1L8 192 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 S100A7L2Q5SY68 101 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 TRPM7Q96QT4 1865 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 A0A087WX48 190 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 OVOL1O14753 267 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 SPTBP11277 2137 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
CX3CL1-204ENST00000565912 ZNF672Q499Z4 452 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms