RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TAS2R19P59542 299 aa17.41■□□□□ 0.38
RAB40C-209ENST00000565511 GINS3Q9BRX5 216 aa17.41■□□□□ 0.38
RAB40C-209ENST00000565511 CSTL1Q9H114 145 aa17.41■□□□□ 0.38
RAB40C-209ENST00000565511 GABARAPH6UMI1 98 aa17.4■□□□□ 0.38
RAB40C-209ENST00000565511 LY6G6CO95867 125 aa17.4■□□□□ 0.38
RAB40C-209ENST00000565511 ALDH3B2P48448 385 aa17.4■□□□□ 0.38
RAB40C-209ENST00000565511 LEMD1Q68G75 181 aa17.4■□□□□ 0.38
RAB40C-209ENST00000565511 CCDC71LQ8N9Z2 235 aa17.4■□□□□ 0.38
RAB40C-209ENST00000565511 ZFAND1Q8TCF1 268 aa17.4■□□□□ 0.38
RAB40C-209ENST00000565511 ATF4P18848 351 aaPredicted RBP17.39■□□□□ 0.37
RAB40C-209ENST00000565511 AARDQ4LEZ3 155 aa17.39■□□□□ 0.37
RAB40C-209ENST00000565511 GLYATL2Q8WU03 294 aa17.39■□□□□ 0.37
RAB40C-209ENST00000565511 TMEM222Q9H0R3 208 aa17.39■□□□□ 0.37
RAB40C-209ENST00000565511 DNAH10Q8IVF4 4471 aa17.39■□□□□ 0.37
RAB40C-209ENST00000565511 MPTX1A8MV57 137 aa17.38■□□□□ 0.37
RAB40C-209ENST00000565511 CLN5O75503 358 aa17.38■□□□□ 0.37
RAB40C-209ENST00000565511 IGKV1-17P01599 117 aa17.38■□□□□ 0.37
RAB40C-209ENST00000565511 DEFB131AP59861 70 aa17.38■□□□□ 0.37
RAB40C-209ENST00000565511 TIGITQ495A1 244 aa17.38■□□□□ 0.37
RAB40C-209ENST00000565511 TMEM170AQ8WVE7 144 aa17.38■□□□□ 0.37
RAB40C-209ENST00000565511 PDCD10Q9BUL8 212 aa17.38■□□□□ 0.37
RAB40C-209ENST00000565511 C6orf62Q9GZU0 229 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-209ENST00000565511 ATG12O94817 140 aa17.37■□□□□ 0.37
RAB40C-209ENST00000565511 CDS2O95674 445 aa17.37■□□□□ 0.37
RAB40C-209ENST00000565511 OPRK1P41145 380 aa17.37■□□□□ 0.37
RAB40C-209ENST00000565511 SELENOHQ8IZQ5 122 aaKnown RBP17.37■□□□□ 0.37
RAB40C-209ENST00000565511 OR4C16Q8NGL9 310 aa17.37■□□□□ 0.37
RAB40C-209ENST00000565511 RNASE11Q8TAA1 199 aaKnown RBP17.37■□□□□ 0.37
RAB40C-209ENST00000565511 SMIM4Q8WVI0 70 aa17.37■□□□□ 0.37
RAB40C-209ENST00000565511 RRNAD1Q96FB5 475 aaKnown RBP17.37■□□□□ 0.37
RAB40C-209ENST00000565511 MRPS26Q9BYN8 205 aaKnown RBP17.37■□□□□ 0.37
RAB40C-209ENST00000565511 NAA60Q9H7X0 242 aa17.37■□□□□ 0.37
RAB40C-209ENST00000565511 PRR13Q9NZ81 148 aa17.37■□□□□ 0.37
RAB40C-209ENST00000565511 VPS13DQ5THJ4 4388 aa17.36■□□□□ 0.37
RAB40C-209ENST00000565511 RGS5O15539 181 aa17.36■□□□□ 0.37
RAB40C-209ENST00000565511 MEF2DQ14814 521 aa17.36■□□□□ 0.37
RAB40C-209ENST00000565511 OR4X1Q8NH49 305 aa17.36■□□□□ 0.37
RAB40C-209ENST00000565511 GPR146Q96CH1 333 aa17.36■□□□□ 0.37
RAB40C-209ENST00000565511 CACNG5Q9UF02 275 aa17.36■□□□□ 0.37
RAB40C-209ENST00000565511 CORTO00230 105 aa17.35■□□□□ 0.37
RAB40C-209ENST00000565511 DEFB4AO15263 64 aa17.35■□□□□ 0.37
RAB40C-209ENST00000565511 CA1P00915 261 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-209ENST00000565511 GIG44P09565 113 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-209ENST00000565511 RPL5P46777 297 aaKnown RBP17.35■□□□□ 0.37
RAB40C-209ENST00000565511 SUB1P53999 127 aaKnown RBP eCLIP17.35■□□□□ 0.37
RAB40C-209ENST00000565511 CMC4P56277 68 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-209ENST00000565511 NANOS2P60321 138 aaKnown RBP17.35■□□□□ 0.37
RAB40C-209ENST00000565511 SPCS3P61009 180 aa17.35■□□□□ 0.37
RAB40C-209ENST00000565511 GPR141Q7Z602 305 aa17.35■□□□□ 0.37
RAB40C-209ENST00000565511 OR11H2Q8NH07 326 aa17.35■□□□□ 0.37
RAB40C-209ENST00000565511 GATAD1Q8WUU5 269 aa17.35■□□□□ 0.37
RAB40C-209ENST00000565511 PHLDA1Q8WV24 401 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-209ENST00000565511 RARRES2Q99969 163 aa17.35■□□□□ 0.37
RAB40C-209ENST00000565511 ENY2Q9NPA8 101 aa17.35■□□□□ 0.37
RAB40C-209ENST00000565511 TEX13DA0A0J9YY54 714 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-209ENST00000565511 DNASE2O00115 360 aaPredicted RBP17.34■□□□□ 0.37
RAB40C-209ENST00000565511 NXPH3O95157 252 aa17.34■□□□□ 0.37
RAB40C-209ENST00000565511 CRYBB3P26998 211 aa17.34■□□□□ 0.37
RAB40C-209ENST00000565511 RPL11P62913 178 aaKnown RBP17.34■□□□□ 0.37
RAB40C-209ENST00000565511 PAFAH1B2P68402 229 aa17.34■□□□□ 0.37
RAB40C-209ENST00000565511 C15orf40Q8WUR7 153 aa17.34■□□□□ 0.37
RAB40C-209ENST00000565511 RBPMSQ93062 196 aaKnown RBP17.34■□□□□ 0.37
RAB40C-209ENST00000565511 RABAC1Q9UI14 185 aa17.34■□□□□ 0.37
RAB40C-209ENST00000565511 GPR132Q9UNW8 380 aa17.34■□□□□ 0.37
RAB40C-209ENST00000565511 C14orf166Q9Y224 244 aaKnown RBP17.34■□□□□ 0.37
RAB40C-209ENST00000565511 TRAV2A0A0B4J234 112 aa17.33■□□□□ 0.36
RAB40C-209ENST00000565511 CRYM-AS1A6NIL9 109 aa17.33■□□□□ 0.36
RAB40C-209ENST00000565511 K7EQG2 157 aa17.33■□□□□ 0.36
RAB40C-209ENST00000565511 P2RY1P47900 373 aa17.33■□□□□ 0.36
RAB40C-209ENST00000565511 SSBP1Q04837 148 aaKnown RBP17.33■□□□□ 0.36
RAB40C-209ENST00000565511 RBMS2Q15434 407 aaKnown RBP17.33■□□□□ 0.36
RAB40C-209ENST00000565511 TMEM268Q5VZI3 342 aa17.33■□□□□ 0.36
RAB40C-209ENST00000565511 STXBP6Q8NFX7 210 aa17.33■□□□□ 0.36
RAB40C-209ENST00000565511 OR52E5Q8NH55 327 aa17.33■□□□□ 0.36
RAB40C-209ENST00000565511 TMEM230Q96A57 120 aa17.33■□□□□ 0.36
RAB40C-209ENST00000565511 DNAH6Q9C0G6 4158 aa17.32■□□□□ 0.36
RAB40C-209ENST00000565511 B3GALNT1O75752 331 aa17.32■□□□□ 0.36
RAB40C-209ENST00000565511 CD5P06127 495 aa17.32■□□□□ 0.36
RAB40C-209ENST00000565511 IGLC1P0CG04 106 aa17.32■□□□□ 0.36
RAB40C-209ENST00000565511 NPPCP23582 126 aa17.32■□□□□ 0.36
RAB40C-209ENST00000565511 MRPS10P82664 201 aaKnown RBP17.32■□□□□ 0.36
RAB40C-209ENST00000565511 PRSS54Q6PEW0 395 aa17.32■□□□□ 0.36
RAB40C-209ENST00000565511 CLVS1Q8IUQ0 354 aaPredicted RBP17.32■□□□□ 0.36
RAB40C-209ENST00000565511 FAM219AQ8IW50 185 aa17.32■□□□□ 0.36
RAB40C-209ENST00000565511 RPP25LQ8N5L8 163 aaKnown RBP17.32■□□□□ 0.36
RAB40C-209ENST00000565511 TMEM217Q8N7C4 229 aa17.32■□□□□ 0.36
RAB40C-209ENST00000565511 DYNC2LI1Q8TCX1 351 aa17.32■□□□□ 0.36
RAB40C-209ENST00000565511 C11orf68Q9H3H3 251 aaKnown RBP17.32■□□□□ 0.36
RAB40C-209ENST00000565511 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.32■□□□□ 0.36
RAB40C-209ENST00000565511 KNCNA6PVL3 124 aa17.31■□□□□ 0.36
RAB40C-209ENST00000565511 DISC1C4P0D8 188 aa17.31■□□□□ 0.36
RAB40C-209ENST00000565511 AKAIN1P0CW23 69 aa17.31■□□□□ 0.36
RAB40C-209ENST00000565511 RND2P52198 227 aa17.31■□□□□ 0.36
RAB40C-209ENST00000565511 OR51S1Q8NGJ8 323 aa17.31■□□□□ 0.36
RAB40C-209ENST00000565511 METTL26Q96S19 204 aa17.31■□□□□ 0.36
RAB40C-209ENST00000565511 KLK5Q9Y337 293 aaPredicted RBP17.31■□□□□ 0.36
RAB40C-209ENST00000565511 U3KQE9 123 aa17.31■□□□□ 0.36
RAB40C-209ENST00000565511 CTDSPLO15194 276 aa17.3■□□□□ 0.36
RAB40C-209ENST00000565511 ZNF688P0C7X2 276 aa17.3■□□□□ 0.36
RAB40C-209ENST00000565511 C4BPBP20851 252 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms