RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 OR4D6Q8NGJ1 314 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 OR10G4Q8NGN3 311 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 OR2G3Q8NGZ4 309 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 OR2T10Q8NGZ9 312 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 OR5B3Q8NH48 314 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 CMTM2Q8TAZ6 248 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 MARCH1Q8TCQ1 289 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 RPS4Y2Q8TD47 263 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 C11orf40Q8WZ69 217 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 AQP3Q92482 292 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 UBE2E3Q969T4 207 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 RERGQ96A58 199 aaPredicted RBP2.73□□□□□ -1.97
CHD9-212ENST00000564641 SLAMF6Q96DU3 332 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 ZMYND19Q96E35 227 aaPredicted RBP2.73□□□□□ -1.97
CHD9-212ENST00000564641 RBMXL1Q96E39 390 aaKnown RBP2.73□□□□□ -1.97
CHD9-212ENST00000564641 IMMP1LQ96LU5 166 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 SMIM14Q96QK8 99 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 OR7D2Q96RA2 312 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 TTTY10Q9BZA0 68 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 NXF5Q9H1B4 397 aaKnown RBP2.73□□□□□ -1.97
CHD9-212ENST00000564641 TMEM106BQ9NUM4 274 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 MRPL27Q9P0M9 148 aaKnown RBP2.73□□□□□ -1.97
CHD9-212ENST00000564641 NAT8Q9UHE5 227 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 PPIAL4AQ9Y536 164 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 ANKRD17O75179 2603 aaKnown RBP2.73□□□□□ -1.97
CHD9-212ENST00000564641 NBPF19A0A087WUL8 3843 aa2.73□□□□□ -1.97
CHD9-212ENST00000564641 TEP1Q99973 2627 aaKnown RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 CELSR2Q9HCU4 2923 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 NSG1A0A0A6YYJ2 146 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 LOC100131303A0A0U1RQF7 123 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 A0A1W2PRS3 328 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 OR5B21A6NL26 309 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 VSTM2BA6NLU5 285 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 TRAPPC2LH3BP13 241 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 K7N7A8 449 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 TRAF3IP2O43734 574 aaPredicted RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 CXCL13O43927 109 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 DEDDO75618 318 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 MT-CO2P00403 227 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 IFNA1P01562 189 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 SERPINA7P05543 415 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 GYPBP06028 91 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 OR10J4P0C629 311 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 ZNF708P17019 499 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 CCNOP22674 350 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 CMPK1P30085 196 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 OTX1P32242 354 aaPredicted RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 SRP14P37108 136 aaKnown RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 RBMXP38159 391 aaKnown RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 LGALS7P47929 136 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 CKS1BP61024 79 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 UBE2NP61088 152 aaKnown RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 RHOGP84095 191 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 ZNF117Q03924 483 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 SLAQ13239 276 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 IL15RAQ13261 267 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 RAB31Q13636 194 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 MSMO1Q15800 293 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 PRSS8Q16651 343 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 MPV17LQ2QL34 196 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 IAH1Q2TAA2 248 aaPredicted RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 TDRG1Q3Y452 100 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 ACTL10Q5JWF8 245 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 TPTE2P1Q5T6R2 138 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 AGTRAPQ6RW13 159 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 TCF24Q7RTU0 167 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 HMGN2P46Q86SG4 172 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 LRP11Q86VZ4 500 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 ZNF547Q8IVP9 402 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 PNKDQ8N490 385 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 KIR3DL3Q8N743 410 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 CSNK1A1LQ8N752 337 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 C14orf178Q8N769 122 aaPredicted RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 CYB561D1Q8N8Q1 229 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 ZFP62Q8NB50 900 aaPredicted RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 NECAP1Q8NC96 275 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 OR52R1Q8NGF1 315 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 OR52E2Q8NGJ4 325 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 FNDC9Q8TBE3 224 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 TSEN15Q8WW01 171 aaKnown RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 PSMF1Q92530 271 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 PTX4Q96A99 478 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 DOCK10Q96BY6 2186 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 FGGYQ96C11 551 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 GPR146Q96CH1 333 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 C10orf35Q96D05 121 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 SIGMAR1Q99720 223 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 EFCAB11Q9BUY7 163 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 NUDT9Q9BW91 350 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 RSPO3Q9BXY4 272 aaPredicted RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 PATZ1Q9HBE1 687 aaKnown RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 WFDC1Q9HC57 220 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 MANBALQ9NQG1 85 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 MRPL22Q9NWU5 206 aaKnown RBP2.72□□□□□ -1.97
CHD9-212ENST00000564641 ZNF586Q9NXT0 402 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 SPRR3Q9UBC9 169 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 CLN8Q9UBY8 286 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 PSG11Q9UQ72 335 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 MED31Q9Y3C7 131 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 MRPS16Q9Y3D3 137 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms