RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 A0A1B0GU03 582 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 HMX3A6NHT5 357 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 MSGN1A6NI15 193 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 CEBPZOSA8MTT3 80 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 MPTX1A8MV57 137 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 G3V318 75 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 ST8SIA3O43173 380 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 SIX6O95475 246 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 IFNA17P01571 189 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 IGHG2P01859 326 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 MT3P25713 68 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 HOXD3P31249 432 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-205ENST00000563283 MAS1LP35410 378 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 C2orf68Q2NKX9 166 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 IAH1Q2TAA2 248 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-205ENST00000563283 UNQ5815/PRO19632Q6UWF5 114 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 GSG1LQ6UXU4 331 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 ZNF562Q6V9R5 426 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 KLHDC1Q8N7A1 406 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 TMEM217Q8N7C4 229 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 OR1L8Q8NGR8 309 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 SRSF12Q8WXF0 261 aaKnown RBP3.97□□□□□ -1.77
CNOT1-205ENST00000563283 NOL4LQ96MY1 436 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-205ENST00000563283 MED28Q9H204 178 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-205ENST00000563283 TMEM14BQ9NUH8 114 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 GSKIPQ9P0R6 139 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 FOXA2Q9Y261 457 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-205ENST00000563283 FBXO7Q9Y3I1 522 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 WSB1Q9Y6I7 421 aa3.97□□□□□ -1.77
CNOT1-205ENST00000563283 TRAV41A0A0B4J266 112 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 A0A1B0GUS0 222 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 A0A1B0GW64 132 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 TEX22C9J3V5 150 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 E7EUB6 86 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 WRBO00258 174 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 REG1AP05451 166 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 TRAPPC2P0DI81 140 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 TRAPPC2BP0DI82 140 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 AREGP15514 252 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 HOXA1P49639 335 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-205ENST00000563283 SPCS3P61009 180 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 HSPE1P61604 102 aaKnown RBP3.96□□□□□ -1.78
CNOT1-205ENST00000563283 RRAS2P62070 204 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-205ENST00000563283 TMEM267Q0VDI3 215 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-205ENST00000563283 FCN2Q15485 313 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 CXorf66Q5JRM2 361 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-205ENST00000563283 Q6ZTC4 211 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 ZNF329Q86UD4 541 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 ZNF429Q86V71 674 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 STPG2Q8N412 459 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 ZBTB8BQ8NAP8 495 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-205ENST00000563283 LFNGQ8NES3 379 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 OR5T1Q8NG75 326 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 OR10W1Q8NGF6 305 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 OR5M8Q8NGP6 311 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 OR5B3Q8NH48 314 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 OR10C1Q96KK4 312 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 C2orf50Q96LR7 162 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 CITED2Q99967 270 aaPredicted RBP3.96□□□□□ -1.78
CNOT1-205ENST00000563283 MAGT1Q9H0U3 335 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 RBKSQ9H477 322 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 PLEKHA3Q9HB20 300 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 ENY2Q9NPA8 101 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 NDUFA4L2Q9NRX3 87 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 COA4Q9NYJ1 87 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 FKBP11Q9NYL4 201 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 ZNF257Q9Y2Q1 563 aa3.96□□□□□ -1.78
CNOT1-205ENST00000563283 TET2Q6N021 2002 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-205ENST00000563283 A0A1W2PN81 502 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 IGLC7A0M8Q6 106 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 PSMB11A5LHX3 300 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 SSSCA1O60232 199 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 PITX3O75364 302 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 TNFRSF6BO95407 300 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 PRH1P02810 166 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 IGF1P05019 195 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 OR13C7P0DN81 318 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 IAPPP10997 89 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 SLC25A6P12236 298 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 CXCL3P19876 107 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 CHRNA7P36544 502 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 NKX2-1P43699 371 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-205ENST00000563283 H2BFSP57053 126 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 S100A10P60903 97 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 POLR2GP62487 172 aaKnown RBP eCLIP3.95□□□□□ -1.78
CNOT1-205ENST00000563283 SLC35B1P78383 322 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 PRCDQ00LT1 54 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 WT1-ASQ06250 92 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 TNFRSF9Q07011 255 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 KIAA0141Q14154 515 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-205ENST00000563283 LRRC37A5PQ49AS3 106 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 AARDQ4LEZ3 155 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 C19orf35Q6ZS72 473 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 HSD17B13Q7Z5P4 300 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-205ENST00000563283 CENPVQ7Z7K6 275 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-205ENST00000563283 OR5AU1Q8NGC0 362 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 OR11H7Q8NGC8 314 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 OR4D5Q8NGN0 318 aa3.95□□□□□ -1.78
CNOT1-205ENST00000563283 OR52E5Q8NH55 327 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms