RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ZNRD1Q9P1U0 126 aa10.59□□□□□ -0.71
USB1-207ENST00000563149 WASHC3Q9Y3C0 194 aa10.59□□□□□ -0.71
USB1-207ENST00000563149 AMMECR1Q9Y4X0 333 aaPredicted RBP10.59□□□□□ -0.71
USB1-207ENST00000563149 GPR179Q6PRD1 2367 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 F2Z2F3 143 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 BMPR1BO00238 502 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 PEX7O00628 323 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 TNFRSF13BO14836 293 aaPredicted RBP10.58□□□□□ -0.72
USB1-207ENST00000563149 APCSP02743 223 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 CDKN1AP38936 164 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 COMPP49747 757 aaPredicted RBP10.58□□□□□ -0.72
USB1-207ENST00000563149 CCL8P80075 99 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 VMA21Q3ZAQ7 101 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 C19orf35Q6ZS72 473 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 ZNF329Q86UD4 541 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 OR10X1Q8NGY0 326 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 VN1R17PQ8TDU5 208 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 ST6GALNAC6Q969X2 333 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 NRN1Q9NPD7 142 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 ZNF355PQ9NSJ1 428 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 DCAF16Q9NXF7 216 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 FBXL7Q9UJT9 491 aa10.58□□□□□ -0.72
USB1-207ENST00000563149 TRAV5A0A0B4J249 113 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 A0A1W2PS18 150 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 CGB1A6NKQ9 187 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 VSTM5A8MXK1 200 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 TMEM178BH3BS89 294 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 NDUFB3O43676 98 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 IGLV2-23P01705 113 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 FOSL1P15407 271 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 CCL3L1P16619 93 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 LGALS7P47929 136 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 WT1-ASQ06250 92 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 ADIPOQQ15848 244 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 TBR1Q16650 682 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 LRRC10Q5BKY1 277 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 PVRIGQ6DKI7 326 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 PATE2Q6UY27 113 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 C22orf34Q6ZV56 151 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 RBMXL3Q8N7X1 1067 aaKnown RBP10.57□□□□□ -0.72
USB1-207ENST00000563149 NPIPB3Q92617 1050 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 FNDC4Q9H6D8 234 aaPredicted RBP10.57□□□□□ -0.72
USB1-207ENST00000563149 TBL2Q9Y4P3 447 aaKnown RBP10.57□□□□□ -0.72
USB1-207ENST00000563149 IGKV1D-37A0A075B6S9 117 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 DIRC3C9JPN6 131 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 E7EUB6 86 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 C16orf97H3BN30 126 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 SPINK4O60575 86 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 ZNF324O75467 553 aaPredicted RBP10.57□□□□□ -0.72
USB1-207ENST00000563149 CD33P20138 364 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 SRIP30626 198 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 AMTP48728 403 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 TCL1AP56279 114 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 MORN5Q5VZ52 161 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 MRPL54Q6P161 138 aaKnown RBP10.57□□□□□ -0.72
USB1-207ENST00000563149 ZCCHC24Q8N2G6 241 aaKnown RBP10.57□□□□□ -0.72
USB1-207ENST00000563149 PERPQ96FX8 193 aa10.57□□□□□ -0.72
USB1-207ENST00000563149 FSTL3O95633 263 aa10.56□□□□□ -0.72
USB1-207ENST00000563149 RPLP1P05386 114 aaKnown RBP10.56□□□□□ -0.72
USB1-207ENST00000563149 HIST1H1EP10412 219 aaKnown RBP10.56□□□□□ -0.72
USB1-207ENST00000563149 MYCNOSP40205 109 aa10.56□□□□□ -0.72
USB1-207ENST00000563149 ZNF124Q15973 351 aa10.56□□□□□ -0.72
USB1-207ENST00000563149 ATP5L2Q7Z4Y8 100 aa10.56□□□□□ -0.72
USB1-207ENST00000563149 Q8N976 141 aa10.56□□□□□ -0.72
USB1-207ENST00000563149 FXYD5Q96DB9 178 aa10.56□□□□□ -0.72
USB1-207ENST00000563149 SAP30LQ9HAJ7 183 aa10.56□□□□□ -0.72
USB1-207ENST00000563149 KAAG1Q9UBP8 84 aa10.56□□□□□ -0.72
USB1-207ENST00000563149 DPRXA6NFQ7 191 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 CRYGCP07315 174 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 PYYP10082 97 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 PRRX1P54821 245 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 KRTDAPP60985 99 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 PAX2Q02962 417 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 KLF5Q13887 457 aaPredicted RBP10.55□□□□□ -0.72
USB1-207ENST00000563149 KIAA1644Q3SXP7 199 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 TDRG1Q3Y452 100 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 TEX45Q8NA69 505 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 NUDT10Q8NFP7 164 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 NUDT11Q96G61 164 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 TRGV9Q99603 122 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 FAM103A1Q9BTL3 118 aaKnown RBP10.55□□□□□ -0.72
USB1-207ENST00000563149 PAM16Q9Y3D7 125 aa10.55□□□□□ -0.72
USB1-207ENST00000563149 FCN3O75636 299 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 OR2J3O76001 311 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 REG1BP48304 166 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 DLX6P56179 175 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 SLC35B1P78383 322 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 SSBP2P81877 361 aaPredicted RBP10.54□□□□□ -0.72
USB1-207ENST00000563149 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 H1FXQ92522 213 aaKnown RBP10.54□□□□□ -0.72
USB1-207ENST00000563149 TMEM68Q96MH6 324 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 ATG101Q9BSB4 218 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 EPDR1Q9UM22 224 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 KLF12Q9Y4X4 402 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 CTRLP40313 264 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 CA7P43166 264 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 UBE2G1P62253 170 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 FAM162BQ5T6X4 162 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 LINC00305Q7Z4B0 112 aa10.54□□□□□ -0.72
USB1-207ENST00000563149 WFDC8Q8IUA0 241 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms