RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 MRPS10P82664 201 aaKnown RBP11.62□□□□□ -0.55
SF3B3-203ENST00000562874 MLANAQ16655 118 aa11.62□□□□□ -0.55
SF3B3-203ENST00000562874 FAM90A2PQ658T7 463 aa11.62□□□□□ -0.55
SF3B3-203ENST00000562874 ZNF600Q6ZNG1 722 aa11.62□□□□□ -0.55
SF3B3-203ENST00000562874 RAB2BQ8WUD1 216 aa11.62□□□□□ -0.55
SF3B3-203ENST00000562874 TMEM222Q9H0R3 208 aa11.62□□□□□ -0.55
SF3B3-203ENST00000562874 CACNG5Q9UF02 275 aa11.62□□□□□ -0.55
SF3B3-203ENST00000562874 CXorf65A6NEN9 183 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 INS-IGF2F8WCM5 200 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 CORTO00230 105 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 TMEM50AO95807 157 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 SSBP1Q04837 148 aaKnown RBP11.61□□□□□ -0.55
SF3B3-203ENST00000562874 TMEM268Q5VZI3 342 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 Q6ZWC4 215 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 SELENOHQ8IZQ5 122 aaKnown RBP11.61□□□□□ -0.55
SF3B3-203ENST00000562874 LILRB2Q8N423 598 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 FAM24BQ8N5W8 94 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 STPG3Q8N7X2 389 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 OR51S1Q8NGJ8 323 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 GLYATL2Q8WU03 294 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 GALNT14Q96FL9 552 aa11.61□□□□□ -0.55
SF3B3-203ENST00000562874 CRYM-AS1A6NIL9 109 aa11.6□□□□□ -0.55
SF3B3-203ENST00000562874 DFFBO76075 338 aa11.6□□□□□ -0.55
SF3B3-203ENST00000562874 CDS2O95674 445 aa11.6□□□□□ -0.55
SF3B3-203ENST00000562874 BMI1P35226 326 aa11.6□□□□□ -0.55
SF3B3-203ENST00000562874 SUB1P53999 127 aaKnown RBP eCLIP11.6□□□□□ -0.55
SF3B3-203ENST00000562874 LEMD1Q68G75 181 aa11.6□□□□□ -0.55
SF3B3-203ENST00000562874 PVRIGQ6DKI7 326 aa11.6□□□□□ -0.55
SF3B3-203ENST00000562874 RBPMSQ93062 196 aaKnown RBP11.6□□□□□ -0.55
SF3B3-203ENST00000562874 GPR146Q96CH1 333 aa11.6□□□□□ -0.55
SF3B3-203ENST00000562874 TP53TG1Q9Y2A0 90 aa11.6□□□□□ -0.55
SF3B3-203ENST00000562874 EPPK1P58107 5090 aaKnown RBP11.59□□□□□ -0.55
SF3B3-203ENST00000562874 KIR2DL5BA0A0G2JN68 375 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 KIR2DL5BA0A0G2JPC4 375 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 ANKRD20A5PA0PJZ0 165 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 H3BMQ9 156 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 CTDSPLO15194 276 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 CLN5O75503 358 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 SPCS3P61009 180 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 RPL11P62913 178 aaKnown RBP11.59□□□□□ -0.55
SF3B3-203ENST00000562874 BSXQ3C1V8 233 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 TIGITQ495A1 244 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 KIR2DL5AQ8N109 375 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 KIR2DL5BQ8NHK3 375 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 TMEM230Q96A57 120 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 RNF183Q96D59 192 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 MS4A6AQ9H2W1 248 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 VSIRQ9H7M9 311 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 GPR132Q9UNW8 380 aa11.59□□□□□ -0.55
SF3B3-203ENST00000562874 UBE2CO00762 179 aa11.58□□□□□ -0.56
SF3B3-203ENST00000562874 NOL3O60936 208 aaKnown RBP11.58□□□□□ -0.56
SF3B3-203ENST00000562874 B3GALNT1O75752 331 aa11.58□□□□□ -0.56
SF3B3-203ENST00000562874 SURF2Q15527 256 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-203ENST00000562874 FAM219AQ8IW50 185 aa11.58□□□□□ -0.56
SF3B3-203ENST00000562874 PRRT1Q99946 306 aa11.58□□□□□ -0.56
SF3B3-203ENST00000562874 SLIRPQ9GZT3 109 aaKnown RBP11.58□□□□□ -0.56
SF3B3-203ENST00000562874 HEYLQ9NQ87 328 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-203ENST00000562874 MCUBQ9NWR8 336 aa11.58□□□□□ -0.56
SF3B3-203ENST00000562874 RABAC1Q9UI14 185 aa11.58□□□□□ -0.56
SF3B3-203ENST00000562874 CEBPZOSA8MTT3 80 aa11.57□□□□□ -0.56
SF3B3-203ENST00000562874 DNASE2O00115 360 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-203ENST00000562874 RND2P52198 227 aa11.57□□□□□ -0.56
SF3B3-203ENST00000562874 TMBIM6P55061 237 aa11.57□□□□□ -0.56
SF3B3-203ENST00000562874 DEFB131AP59861 70 aa11.57□□□□□ -0.56
SF3B3-203ENST00000562874 DHODHQ02127 395 aa11.57□□□□□ -0.56
SF3B3-203ENST00000562874 TNFRSF9Q07011 255 aa11.57□□□□□ -0.56
SF3B3-203ENST00000562874 AARDQ4LEZ3 155 aa11.57□□□□□ -0.56
SF3B3-203ENST00000562874 SLC24A4Q8NFF2 622 aa11.57□□□□□ -0.56
SF3B3-203ENST00000562874 STXBP6Q8NFX7 210 aa11.57□□□□□ -0.56
SF3B3-203ENST00000562874 OR4X1Q8NH49 305 aa11.57□□□□□ -0.56
SF3B3-203ENST00000562874 TMEM170AQ8WVE7 144 aa11.57□□□□□ -0.56
SF3B3-203ENST00000562874 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-203ENST00000562874 GSTZ1O43708 216 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-203ENST00000562874 IGKV1-17P01599 117 aa11.56□□□□□ -0.56
SF3B3-203ENST00000562874 HTR2BP41595 481 aa11.56□□□□□ -0.56
SF3B3-203ENST00000562874 PAFAH1B2P68402 229 aa11.56□□□□□ -0.56
SF3B3-203ENST00000562874 TMEM187Q14656 261 aa11.56□□□□□ -0.56
SF3B3-203ENST00000562874 OR52E5Q8NH55 327 aa11.56□□□□□ -0.56
SF3B3-203ENST00000562874 METTL26Q96S19 204 aa11.56□□□□□ -0.56
SF3B3-203ENST00000562874 BCL7BQ9BQE9 202 aa11.56□□□□□ -0.56
SF3B3-203ENST00000562874 MPTX1A8MV57 137 aa11.55□□□□□ -0.56
SF3B3-203ENST00000562874 CA1P00915 261 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-203ENST00000562874 AKR1C4P17516 323 aa11.55□□□□□ -0.56
SF3B3-203ENST00000562874 TNFSF8P32971 234 aa11.55□□□□□ -0.56
SF3B3-203ENST00000562874 P2RY1P47900 373 aa11.55□□□□□ -0.56
SF3B3-203ENST00000562874 RBMS2Q15434 407 aaKnown RBP11.55□□□□□ -0.56
SF3B3-203ENST00000562874 PRSS54Q6PEW0 395 aa11.55□□□□□ -0.56
SF3B3-203ENST00000562874 MCFD2Q8NI22 146 aa11.55□□□□□ -0.56
SF3B3-203ENST00000562874 LINC00476Q8WZB0 136 aa11.55□□□□□ -0.56
SF3B3-203ENST00000562874 CSTL1Q9H114 145 aa11.55□□□□□ -0.56
SF3B3-203ENST00000562874 TMEM231Q9H6L2 316 aa11.55□□□□□ -0.56
SF3B3-203ENST00000562874 TMEM56-RWDD3S4R434 201 aa11.55□□□□□ -0.56
SF3B3-203ENST00000562874 RPS10-NUDT3A0A1W2PQS6 291 aa11.54□□□□□ -0.56
SF3B3-203ENST00000562874 NUPR2A6NF83 97 aa11.54□□□□□ -0.56
SF3B3-203ENST00000562874 IGLC1P0CG04 106 aa11.54□□□□□ -0.56
SF3B3-203ENST00000562874 SULT1A3P0DMM9 295 aa11.54□□□□□ -0.56
SF3B3-203ENST00000562874 SULT1A4P0DMN0 295 aa11.54□□□□□ -0.56
SF3B3-203ENST00000562874 NPPCP23582 126 aa11.54□□□□□ -0.56
SF3B3-203ENST00000562874 NPY1RP25929 384 aa11.54□□□□□ -0.56
SF3B3-203ENST00000562874 RPL5P46777 297 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms