RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ELP2Q6IA86 826 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 RPL13AP3Q6NVV1 102 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 WDR59Q6PJI9 974 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 ZNF773Q6PK81 442 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 XKRXQ6PP77 449 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 OPN5Q6U736 354 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 TOMM20LQ6UXN7 152 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 CLEC19AQ6UXS0 136 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 GKN2Q86XP6 184 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 PHF13Q86YI8 300 aaPredicted RBP1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 MUC15Q8N387 334 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 ZFP41Q8N8Y5 198 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 FDCSPQ8NFU4 85 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 OR4M1Q8NGD0 313 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 OR9I1Q8NGQ6 314 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 OR2K2Q8NGT1 345 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 OR13D1Q8NGV5 346 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 LINC01560Q8TB33 94 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 ORAOV1Q8WV07 137 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 C1orf54Q8WWF1 131 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 MBD3L1Q8WWY6 194 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 YIPF5Q969M3 257 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 ROPN1LQ96C74 230 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 BIRC8Q96P09 236 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 COL21A1Q96P44 957 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 OR4K3Q96R72 315 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 PEBP4Q96S96 227 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 HSD17B10Q99714 261 aaKnown RBP1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 MARVELD1Q9BSK0 173 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 TBL1XR1Q9BZK7 514 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 MIXL1Q9H2W2 232 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 WFDC1Q9HC57 220 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 HES4Q9HCC6 221 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 PRTFDC1Q9NRG1 225 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 COPZ2Q9P299 210 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 VAX2Q9UIW0 290 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 VPREB3Q9UKI3 123 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 OR52A1Q9UKL2 312 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 SSR3Q9UNL2 185 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 POMPQ9Y244 141 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 CARHSP1Q9Y2V2 147 aaKnown RBP1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 WASHC3Q9Y3C0 194 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 SLC22A7Q9Y694 548 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 FN1P02751 2386 aaKnown RBP1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 CHD3Q12873 2000 aaKnown RBP1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 HRNRQ86YZ3 2850 aaPredicted RBP1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 DNHD1Q96M86 4753 aa1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 MAP1AP78559 2803 aaPredicted RBP1.52□□□□□ -2.17
HDGFL3-202ENST00000562702 ANKHD1Q8IWZ3 2542 aaKnown RBP1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 ALPK2Q86TB3 2170 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 NIPBLQ6KC79 2804 aaeCLIP1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 DYSFO75923 2080 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 EXPH5Q8NEV8 1989 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 SMIM26A0A096LP01 95 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 TRAV8-3A0A0A6YYJ7 113 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 TRAV8-1A0A0A6YYK1 113 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 IGHV2-26A0A0B4J1V2 119 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 LOC389332A0A1B0GUA5 103 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 MAP1LC3B2A6NCE7 125 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 FAM159BA6NKW6 160 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 RFPL4AA6NLU0 287 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 A8MUU9 505 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 FAM25AB3EWG3 89 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 FAM25CB3EWG5 89 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 FAM25GB3EWG6 89 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 B4DEV8 164 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 EEF1E1-BLOC1S5C9J1V9 151 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 C9JQL5 133 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 RFPL4AL1F8VTS6 287 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 H3BP45 60 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 K7EMT4 169 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 EEF1E1O43324 174 aaKnown RBP1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 EIF1BO60739 113 aaKnown RBP1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 STK16O75716 305 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 NDUFC2O95298 119 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 OXTP01178 125 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 NBEAP1P0C6P0 100 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 PIRTP0C851 137 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 CDK2P24941 298 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 CXCR1P25024 350 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 SDC4P31431 198 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 PRSS3P35030 304 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 PHBP35232 272 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 HSPA9P38646 679 aaKnown RBP1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 EIF1P41567 113 aaKnown RBP1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 MAP2K4P45985 399 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 SYNJ2BPP57105 145 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 TPI1P60174 286 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 RHOBP62745 196 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 HLA-DRB3P79483 266 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 FABP9Q0Z7S8 132 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 PRDX4Q13162 271 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 CEACAM16Q2WEN9 425 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 ACOT6Q3I5F7 207 aaPredicted RBP1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 FBXL19-AS1Q494R0 122 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 LPCAT3Q6P1A2 487 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 ZFP1Q6P2D0 407 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 PLET1Q6UQ28 207 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 TMEM205Q6UW68 189 aa1.51□□□□□ -2.17
HDGFL3-202ENST00000562702 FBXW12Q6X9E4 464 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms