RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 MARCH1Q8TCQ1 289 aa11.92□□□□□ -0.5
SNX1-213ENST00000561026 GATAD1Q8WUU5 269 aa11.92□□□□□ -0.5
SNX1-213ENST00000561026 MS4A6AQ9H2W1 248 aa11.92□□□□□ -0.5
SNX1-213ENST00000561026 ENY2Q9NPA8 101 aa11.92□□□□□ -0.5
SNX1-213ENST00000561026 KLK5Q9Y337 293 aaPredicted RBP11.92□□□□□ -0.5
SNX1-213ENST00000561026 IGHV3-66A0A0C4DH42 116 aa11.91□□□□□ -0.5
SNX1-213ENST00000561026 GABARAPH6UMI1 98 aa11.91□□□□□ -0.5
SNX1-213ENST00000561026 DNASE2O00115 360 aaPredicted RBP11.91□□□□□ -0.5
SNX1-213ENST00000561026 RPL5P46777 297 aaKnown RBP11.91□□□□□ -0.5
SNX1-213ENST00000561026 MLANAQ16655 118 aa11.91□□□□□ -0.5
SNX1-213ENST00000561026 Q6ZRM9 215 aa11.91□□□□□ -0.5
SNX1-213ENST00000561026 MIXL1Q9H2W2 232 aa11.91□□□□□ -0.5
SNX1-213ENST00000561026 FNDC4Q9H6D8 234 aaPredicted RBP11.91□□□□□ -0.5
SNX1-213ENST00000561026 MRPL36Q9P0J6 103 aaKnown RBP11.91□□□□□ -0.5
SNX1-213ENST00000561026 TRAV2A0A0B4J234 112 aa11.9□□□□□ -0.5
SNX1-213ENST00000561026 CLN5O75503 358 aa11.9□□□□□ -0.5
SNX1-213ENST00000561026 CDS2O95674 445 aa11.9□□□□□ -0.5
SNX1-213ENST00000561026 NPPCP23582 126 aa11.9□□□□□ -0.5
SNX1-213ENST00000561026 RPL11P62913 178 aaKnown RBP11.9□□□□□ -0.5
SNX1-213ENST00000561026 BSXQ3C1V8 233 aa11.9□□□□□ -0.5
SNX1-213ENST00000561026 AARDQ4LEZ3 155 aa11.9□□□□□ -0.5
SNX1-213ENST00000561026 OR4X1Q8NH49 305 aa11.9□□□□□ -0.5
SNX1-213ENST00000561026 RNASE11Q8TAA1 199 aaKnown RBP11.9□□□□□ -0.5
SNX1-213ENST00000561026 RARRES2Q99969 163 aa11.9□□□□□ -0.5
SNX1-213ENST00000561026 TMEM222Q9H0R3 208 aa11.9□□□□□ -0.5
SNX1-213ENST00000561026 OPRK1P41145 380 aa11.89□□□□□ -0.51
SNX1-213ENST00000561026 DEFB131AP59861 70 aa11.89□□□□□ -0.51
SNX1-213ENST00000561026 SPCS3P61009 180 aa11.89□□□□□ -0.51
SNX1-213ENST00000561026 MRPS10P82664 201 aaKnown RBP11.89□□□□□ -0.51
SNX1-213ENST00000561026 SSBP1Q04837 148 aaKnown RBP11.89□□□□□ -0.51
SNX1-213ENST00000561026 MEF2DQ14814 521 aa11.89□□□□□ -0.51
SNX1-213ENST00000561026 FAM219AQ8IW50 185 aa11.89□□□□□ -0.51
SNX1-213ENST00000561026 OR11H2Q8NH07 326 aa11.89□□□□□ -0.51
SNX1-213ENST00000561026 OR52E5Q8NH55 327 aa11.89□□□□□ -0.51
SNX1-213ENST00000561026 GLYATL2Q8WU03 294 aa11.89□□□□□ -0.51
SNX1-213ENST00000561026 RTBDNQ9BSG5 229 aaPredicted RBP11.89□□□□□ -0.51
SNX1-213ENST00000561026 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
SNX1-213ENST00000561026 A0A1W2PS18 150 aa11.88□□□□□ -0.51
SNX1-213ENST00000561026 CTDSP2O14595 271 aa11.88□□□□□ -0.51
SNX1-213ENST00000561026 RGS5O15539 181 aa11.88□□□□□ -0.51
SNX1-213ENST00000561026 OR5AC1P0C628 307 aa11.88□□□□□ -0.51
SNX1-213ENST00000561026 LEMD1Q68G75 181 aa11.88□□□□□ -0.51
SNX1-213ENST00000561026 FAAP20Q6NZ36 180 aa11.88□□□□□ -0.51
SNX1-213ENST00000561026 FAM24BQ8N5W8 94 aa11.88□□□□□ -0.51
SNX1-213ENST00000561026 PHLDA1Q8WV24 401 aaPredicted RBP11.88□□□□□ -0.51
SNX1-213ENST00000561026 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.88□□□□□ -0.51
SNX1-213ENST00000561026 C14orf166Q9Y224 244 aaKnown RBP11.88□□□□□ -0.51
SNX1-213ENST00000561026 TEX13DA0A0J9YY54 714 aaPredicted RBP11.87□□□□□ -0.51
SNX1-213ENST00000561026 SCGB2A1O75556 95 aa11.87□□□□□ -0.51
SNX1-213ENST00000561026 CA1P00915 261 aaPredicted RBP11.87□□□□□ -0.51
SNX1-213ENST00000561026 IGKV1-17P01599 117 aa11.87□□□□□ -0.51
SNX1-213ENST00000561026 CRYBB3P26998 211 aa11.87□□□□□ -0.51
SNX1-213ENST00000561026 HTR2BP41595 481 aa11.87□□□□□ -0.51
SNX1-213ENST00000561026 SURF2Q15527 256 aaPredicted RBP11.87□□□□□ -0.51
SNX1-213ENST00000561026 LHFPL5Q8TAF8 219 aa11.87□□□□□ -0.51
SNX1-213ENST00000561026 RBPMSQ93062 196 aaKnown RBP11.87□□□□□ -0.51
SNX1-213ENST00000561026 TMEM230Q96A57 120 aa11.87□□□□□ -0.51
SNX1-213ENST00000561026 METTL26Q96S19 204 aa11.87□□□□□ -0.51
SNX1-213ENST00000561026 NAA60Q9H7X0 242 aa11.87□□□□□ -0.51
SNX1-213ENST00000561026 RABAC1Q9UI14 185 aa11.87□□□□□ -0.51
SNX1-213ENST00000561026 TRAV30A0A087WSZ9 112 aa11.86□□□□□ -0.51
SNX1-213ENST00000561026 ALDH3B2P48448 385 aa11.86□□□□□ -0.51
SNX1-213ENST00000561026 DHODHQ02127 395 aa11.86□□□□□ -0.51
SNX1-213ENST00000561026 SPCS2Q15005 226 aa11.86□□□□□ -0.51
SNX1-213ENST00000561026 GPR141Q7Z602 305 aa11.86□□□□□ -0.51
SNX1-213ENST00000561026 SELENOHQ8IZQ5 122 aaKnown RBP11.86□□□□□ -0.51
SNX1-213ENST00000561026 SMIM4Q8WVI0 70 aa11.86□□□□□ -0.51
SNX1-213ENST00000561026 C11orf68Q9H3H3 251 aaKnown RBP11.86□□□□□ -0.51
SNX1-213ENST00000561026 RPS10-NUDT3A0A1W2PQS6 291 aa11.85□□□□□ -0.51
SNX1-213ENST00000561026 DISC1C4P0D8 188 aa11.85□□□□□ -0.51
SNX1-213ENST00000561026 P2RY1P47900 373 aa11.85□□□□□ -0.51
SNX1-213ENST00000561026 TMEM187Q14656 261 aa11.85□□□□□ -0.51
SNX1-213ENST00000561026 TIGITQ495A1 244 aa11.85□□□□□ -0.51
SNX1-213ENST00000561026 STHQ8IWL8 128 aa11.85□□□□□ -0.51
SNX1-213ENST00000561026 C11orf45Q8TAV5 145 aa11.85□□□□□ -0.51
SNX1-213ENST00000561026 GPR146Q96CH1 333 aa11.85□□□□□ -0.51
SNX1-213ENST00000561026 MRPS26Q9BYN8 205 aaKnown RBP11.85□□□□□ -0.51
SNX1-213ENST00000561026 HEYLQ9NQ87 328 aaPredicted RBP11.85□□□□□ -0.51
SNX1-213ENST00000561026 CACNG5Q9UF02 275 aa11.85□□□□□ -0.51
SNX1-213ENST00000561026 GPR132Q9UNW8 380 aa11.85□□□□□ -0.51
SNX1-213ENST00000561026 CRYM-AS1A6NIL9 109 aa11.84□□□□□ -0.51
SNX1-213ENST00000561026 K7EQG2 157 aa11.84□□□□□ -0.51
SNX1-213ENST00000561026 CTDSPLO15194 276 aa11.84□□□□□ -0.51
SNX1-213ENST00000561026 NANOS2P60321 138 aaKnown RBP11.84□□□□□ -0.51
SNX1-213ENST00000561026 C2orf83Q53S99 150 aa11.84□□□□□ -0.51
SNX1-213ENST00000561026 TMEM268Q5VZI3 342 aa11.84□□□□□ -0.51
SNX1-213ENST00000561026 PRSS54Q6PEW0 395 aa11.84□□□□□ -0.51
SNX1-213ENST00000561026 STXBP6Q8NFX7 210 aa11.84□□□□□ -0.51
SNX1-213ENST00000561026 OR4C16Q8NGL9 310 aa11.84□□□□□ -0.51
SNX1-213ENST00000561026 RNASEH2CQ8TDP1 164 aaKnown RBP11.84□□□□□ -0.51
SNX1-213ENST00000561026 GRAMD2BQ96HH9 432 aa11.84□□□□□ -0.51
SNX1-213ENST00000561026 NARS2Q96I59 477 aaKnown RBP11.84□□□□□ -0.51
SNX1-213ENST00000561026 MFFQ9GZY8 342 aa11.84□□□□□ -0.51
SNX1-213ENST00000561026 KMT2AQ03164 3969 aa11.83□□□□□ -0.51
SNX1-213ENST00000561026 IGLC1P0CG04 106 aa11.83□□□□□ -0.52
SNX1-213ENST00000561026 AKAIN1P0CW23 69 aa11.83□□□□□ -0.52
SNX1-213ENST00000561026 SLC25A4P12235 298 aa11.83□□□□□ -0.52
SNX1-213ENST00000561026 RBMS2Q15434 407 aaKnown RBP11.83□□□□□ -0.52
SNX1-213ENST00000561026 SLC24A4Q8NFF2 622 aa11.83□□□□□ -0.52
SNX1-213ENST00000561026 DCANP1Q8TF63 244 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms