RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ELOVL1Q9BW60 279 aa15.46■□□□□ 0.07
TSPAN3-207ENST00000559494 LGALS9O00182 355 aa15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 WRBO00258 174 aa15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 PRB2P02812 416 aaPredicted RBP15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 CSN3P07498 182 aa15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 NKX2-1P43699 371 aaPredicted RBP15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 POLR2GP62487 172 aaKnown RBP eCLIP15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 FAM106AQ4KMX7 169 aa15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 NOXA1Q86UR1 476 aa15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 RNASEH2CQ8TDP1 164 aaKnown RBP15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 ZNF414Q96IQ9 312 aa15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 OR4C12Q96R67 309 aa15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 GPN1Q9HCN4 374 aaPredicted RBP15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 GSKIPQ9P0R6 139 aa15.45■□□□□ 0.06
TSPAN3-207ENST00000559494 SNRPGP15A8MWD9 76 aa15.44■□□□□ 0.06
TSPAN3-207ENST00000559494 PRAF2O60831 178 aa15.44■□□□□ 0.06
TSPAN3-207ENST00000559494 OPRK1P41145 380 aa15.44■□□□□ 0.06
TSPAN3-207ENST00000559494 RGS21Q2M5E4 152 aa15.44■□□□□ 0.06
TSPAN3-207ENST00000559494 REC114Q7Z4M0 266 aa15.44■□□□□ 0.06
TSPAN3-207ENST00000559494 ZNF436Q9C0F3 470 aaPredicted RBP15.44■□□□□ 0.06
TSPAN3-207ENST00000559494 GAR1Q9NY12 217 aaKnown RBP15.44■□□□□ 0.06
TSPAN3-207ENST00000559494 ZNF320A2RRD8 509 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 C15orf62A8K5M9 175 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 FAM25EA8MYX2 175 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 TMEM50AO95807 157 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 NPBWR1P48145 328 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 ATP5IP56385 69 aaPredicted RBP15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 UNQ9165/PRO28630Q6UXU0 137 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 ADAMTSL5Q6ZMM2 481 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 CIB3Q96Q77 187 aaPredicted RBP15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 PEMTQ9UBM1 199 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 C5orf51A6NDU8 294 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 GNG7O60262 68 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 EDN2P20800 178 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 OR4X1Q8NH49 305 aa15.43■□□□□ 0.06
TSPAN3-207ENST00000559494 RPS10-NUDT3A0A1W2PQS6 291 aa15.42■□□□□ 0.06
TSPAN3-207ENST00000559494 C2orf70A6NJV1 201 aa15.42■□□□□ 0.06
TSPAN3-207ENST00000559494 NUPL2O15504 423 aaKnown RBP15.42■□□□□ 0.06
TSPAN3-207ENST00000559494 MBPP02686 304 aaPredicted RBP15.42■□□□□ 0.06
TSPAN3-207ENST00000559494 IFNA4P05014 189 aa15.42■□□□□ 0.06
TSPAN3-207ENST00000559494 PRSS54Q6PEW0 395 aa15.42■□□□□ 0.06
TSPAN3-207ENST00000559494 HAPLN4Q86UW8 402 aa15.42■□□□□ 0.06
TSPAN3-207ENST00000559494 C2orf50Q96LR7 162 aa15.42■□□□□ 0.06
TSPAN3-207ENST00000559494 SIGLEC8Q9NYZ4 499 aa15.42■□□□□ 0.06
TSPAN3-207ENST00000559494 NDUFA4O00483 81 aa15.41■□□□□ 0.06
TSPAN3-207ENST00000559494 CLN5O75503 358 aa15.41■□□□□ 0.06
TSPAN3-207ENST00000559494 SCGB1D2O95969 90 aa15.41■□□□□ 0.06
TSPAN3-207ENST00000559494 IGLV1-51P01701 117 aa15.41■□□□□ 0.06
TSPAN3-207ENST00000559494 PAX9P55771 341 aa15.41■□□□□ 0.06
TSPAN3-207ENST00000559494 CD69Q07108 199 aa15.41■□□□□ 0.06
TSPAN3-207ENST00000559494 IL15RAQ13261 267 aa15.41■□□□□ 0.06
TSPAN3-207ENST00000559494 OXA1LQ15070 435 aa15.41■□□□□ 0.06
TSPAN3-207ENST00000559494 TM4SF20Q53R12 229 aa15.41■□□□□ 0.06
TSPAN3-207ENST00000559494 AURKAIP1Q9NWT8 199 aaPredicted RBP15.41■□□□□ 0.06
TSPAN3-207ENST00000559494 TMEM213A2RRL7 107 aa15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 A8MWP6 167 aa15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 SSSCA1O60232 199 aa15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 LY86O95711 162 aa15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 SLC25A4P12235 298 aa15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 FOLR2P14207 255 aa15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 RAB11AP62491 216 aa15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 SPANXN5Q5MJ07 72 aa15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 GSG1LQ6UXU4 331 aa15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 SMIM8Q96KF7 97 aa15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 PSENENQ9NZ42 101 aa15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 PAIP2BQ9ULR5 123 aaKnown RBP15.4■□□□□ 0.06
TSPAN3-207ENST00000559494 H3BP45 60 aa15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 CBLN1P23435 193 aa15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 GPX4P36969 197 aaPredicted RBP15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 RND2P52198 227 aa15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 RPP30P78346 268 aaKnown RBP15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 RELQ04864 619 aaPredicted RBP15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 ETFRF1Q6IPR1 90 aa15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 TMEM116Q8NCL8 245 aa15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 TMEM190Q8WZ59 177 aa15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 NPIPB3Q92617 1050 aa15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 RCL1Q9Y2P8 373 aaKnown RBP15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 ALG5Q9Y673 324 aa15.39■□□□□ 0.05
TSPAN3-207ENST00000559494 IGHV3OR16-8A0A075B7F1 116 aa15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 WI2-2373I1.2A0A1W2PRP0 233 aa15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 C7orf66A4D0T2 115 aa15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 SIX6O95475 246 aa15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 IGKV1-17P01599 117 aa15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 ELLP55199 621 aaPredicted RBP15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 SLC16A13Q7RTY0 426 aa15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 CACNG8Q8WXS5 425 aa15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 RAB40CQ96S21 281 aa15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 ZMAT5Q9UDW3 170 aaKnown RBP15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 UFC1Q9Y3C8 167 aa15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 STRAPQ9Y3F4 350 aaKnown RBP15.38■□□□□ 0.05
TSPAN3-207ENST00000559494 PRKDCP78527 4128 aaKnown RBP15.37■□□□□ 0.05
TSPAN3-207ENST00000559494 PRSS46E5RG02 174 aa15.37■□□□□ 0.05
TSPAN3-207ENST00000559494 K7EPK0 472 aa15.37■□□□□ 0.05
TSPAN3-207ENST00000559494 C8orf88P0DMB2 117 aa15.37■□□□□ 0.05
TSPAN3-207ENST00000559494 GAMTQ14353 236 aa15.37■□□□□ 0.05
TSPAN3-207ENST00000559494 TIGITQ495A1 244 aa15.37■□□□□ 0.05
TSPAN3-207ENST00000559494 ACY3Q96HD9 319 aa15.37■□□□□ 0.05
TSPAN3-207ENST00000559494 C20orf24Q9BUV8 137 aa15.37■□□□□ 0.05
TSPAN3-207ENST00000559494 TRAV30A0A087WSZ9 112 aa15.36■□□□□ 0.05
TSPAN3-207ENST00000559494 GOSR2O14653 212 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms