RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 MDP1Q86V88 176 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 PHLDA1Q8WV24 401 aaPredicted RBP8.15□□□□□ -1.1
TRPM1-208ENST00000558768 NPIPB3Q92617 1050 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 SRSF8Q9BRL6 282 aaKnown RBP8.15□□□□□ -1.1
TRPM1-208ENST00000558768 LAMTOR5O43504 91 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 VGLL1Q99990 258 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 A0A1W2PRD5 423 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 A0A1W2PRF3 423 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 A0A1W2PRM7 423 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 ASIPP42127 132 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 FHL1Q13642 323 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 ZNF146Q15072 292 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 AGMATQ9BSE5 352 aa8.15□□□□□ -1.1
TRPM1-208ENST00000558768 IGHV3-21A0A0B4J1V1 117 aa8.15□□□□□ -1.11
TRPM1-208ENST00000558768 IFI27P40305 119 aaPredicted RBP8.15□□□□□ -1.11
TRPM1-208ENST00000558768 EGR4Q05215 589 aa8.15□□□□□ -1.11
TRPM1-208ENST00000558768 FAM74A4Q5TZK3 123 aa8.15□□□□□ -1.11
TRPM1-208ENST00000558768 LINC00305Q7Z4B0 112 aa8.15□□□□□ -1.11
TRPM1-208ENST00000558768 DDB2Q92466 427 aa8.15□□□□□ -1.11
TRPM1-208ENST00000558768 METTL26Q96S19 204 aa8.15□□□□□ -1.11
TRPM1-208ENST00000558768 IL23AQ9NPF7 189 aa8.15□□□□□ -1.11
TRPM1-208ENST00000558768 SLC25A10Q9UBX3 287 aaPredicted RBP8.15□□□□□ -1.11
TRPM1-208ENST00000558768 NCR2O95944 276 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 DUX4L9Q6RFH8 374 aaPredicted RBP8.14□□□□□ -1.11
TRPM1-208ENST00000558768 CCL4L1Q8NHW4 92 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 WFDC12Q8WWY7 111 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 DEFB127Q9H1M4 99 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 C9JCJ5 164 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 IGFBP2P18065 325 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 CSRP1P21291 193 aaKnown RBP8.14□□□□□ -1.11
TRPM1-208ENST00000558768 SLC25A48Q6ZT89 311 aaKnown RBP8.14□□□□□ -1.11
TRPM1-208ENST00000558768 HEATR5BQ9P2D3 2071 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 TNS1Q9HBL0 1735 aaKnown RBP8.14□□□□□ -1.11
TRPM1-208ENST00000558768 IGHV2-26A0A0B4J1V2 119 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 M0R381 172 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 CCL25O15444 150 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 CELA3AP09093 270 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 PLAURQ03405 335 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 FAM90A2PQ658T7 463 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 LILRA6Q6PI73 481 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 FAM159AQ6UWV7 190 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 PLEKHB2Q96CS7 222 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 LY96Q9Y6Y9 160 aa8.14□□□□□ -1.11
TRPM1-208ENST00000558768 SHISA7A6NL88 538 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 PRRG2O14669 202 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 MRPL55Q7Z7F7 128 aaKnown RBP8.13□□□□□ -1.11
TRPM1-208ENST00000558768 GCSAMQ8N6F7 178 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 MRPL20Q9BYC9 149 aaKnown RBP8.13□□□□□ -1.11
TRPM1-208ENST00000558768 RNF186Q9NXI6 227 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 TRAV8-3A0A0A6YYJ7 113 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 TOMM40O96008 361 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 GNG5P63218 68 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 WIPI1Q5MNZ9 446 aaPredicted RBP8.13□□□□□ -1.11
TRPM1-208ENST00000558768 GPHA2Q96T91 129 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 H3BTX0 84 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 SYNJ2BPP57105 145 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 TFF3Q07654 80 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 ALKBH6Q3KRA9 238 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 HCP5Q6MZN7 132 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 PATE1Q8WXA2 126 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 CACNG8Q8WXS5 425 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 KCNK17Q96T54 332 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 TNFRSF18Q9Y5U5 241 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 SPTA1P02549 2419 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 TMPRSS2O15393 492 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 DRD3P35462 400 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 KIF26BQ2KJY2 2108 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 FSCN3Q9NQT6 498 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 NLRC5Q86WI3 1866 aa8.13□□□□□ -1.11
TRPM1-208ENST00000558768 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 WNT9BO14905 357 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 NPFFO15130 113 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 CCL2P13500 99 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 DEFB103AP81534 67 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 ID3Q02535 119 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 FAM78AQ5JUQ0 283 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 FAM27BQ5VT28 67 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 PCSK4Q6UW60 755 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 SAXO1Q8IYX7 474 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 FAM89BQ8N5H3 189 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 C15orf53Q8NAA6 179 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 TMEM190Q8WZ59 177 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 SCN10AQ9Y5Y9 1956 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 FOXI3A8MTJ6 420 aaPredicted RBP8.12□□□□□ -1.11
TRPM1-208ENST00000558768 MPV17P39210 176 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 IL15RAQ13261 267 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 CCDC144NLQ6NUI1 221 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 UNQ6494/PRO21346Q6UXR6 183 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 TMEM86BQ8N661 226 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 ANKRD29Q8N6D5 301 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 HES7Q9BYE0 225 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 V9GYY9 64 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 PLCE1Q9P212 2302 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 CRPP02741 224 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 SP9P0CG40 484 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 RNF7Q9UBF6 113 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 MYOFQ9NZM1 2061 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 CEP250Q9BV73 2442 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 FABP5P3A8MUU1 101 aa8.12□□□□□ -1.11
TRPM1-208ENST00000558768 IGHMP01871 453 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms