RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 MARCH1Q8TCQ1 289 aa10.78□□□□□ -0.68
SHMT2-235ENST00000557740 VSIRQ9H7M9 311 aa10.78□□□□□ -0.68
SHMT2-235ENST00000557740 ZFAND3Q9H8U3 227 aa10.78□□□□□ -0.68
SHMT2-235ENST00000557740 C14orf166Q9Y224 244 aaKnown RBP10.78□□□□□ -0.68
SHMT2-235ENST00000557740 EPPK1P58107 5090 aaKnown RBP10.78□□□□□ -0.68
SHMT2-235ENST00000557740 GABARAPH6UMI1 98 aa10.77□□□□□ -0.69
SHMT2-235ENST00000557740 DFFBO76075 338 aa10.77□□□□□ -0.69
SHMT2-235ENST00000557740 TMEM50AO95807 157 aa10.77□□□□□ -0.69
SHMT2-235ENST00000557740 MRPS10P82664 201 aaKnown RBP10.77□□□□□ -0.69
SHMT2-235ENST00000557740 MEF2DQ14814 521 aa10.77□□□□□ -0.69
SHMT2-235ENST00000557740 FAM219AQ8IW50 185 aa10.77□□□□□ -0.69
SHMT2-235ENST00000557740 TMEM222Q9H0R3 208 aa10.77□□□□□ -0.69
SHMT2-235ENST00000557740 MS4A6AQ9H2W1 248 aa10.77□□□□□ -0.69
SHMT2-235ENST00000557740 RABAC1Q9UI14 185 aa10.77□□□□□ -0.69
SHMT2-235ENST00000557740 TRAV2A0A0B4J234 112 aa10.76□□□□□ -0.69
SHMT2-235ENST00000557740 A0A0G2JRQ6 117 aa10.76□□□□□ -0.69
SHMT2-235ENST00000557740 TEX13DA0A0J9YY54 714 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-235ENST00000557740 A0A1B0GU03 582 aa10.76□□□□□ -0.69
SHMT2-235ENST00000557740 A0A1W2PS18 150 aa10.76□□□□□ -0.69
SHMT2-235ENST00000557740 CLN5O75503 358 aa10.76□□□□□ -0.69
SHMT2-235ENST00000557740 CA1P00915 261 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-235ENST00000557740 APOHP02749 345 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-235ENST00000557740 OR5AC1P0C628 307 aa10.76□□□□□ -0.69
SHMT2-235ENST00000557740 NPPCP23582 126 aa10.76□□□□□ -0.69
SHMT2-235ENST00000557740 SSBP1Q04837 148 aaKnown RBP10.76□□□□□ -0.69
SHMT2-235ENST00000557740 PVRIGQ6DKI7 326 aa10.76□□□□□ -0.69
SHMT2-235ENST00000557740 NARS2Q96I59 477 aaKnown RBP10.76□□□□□ -0.69
SHMT2-235ENST00000557740 METTL26Q96S19 204 aa10.76□□□□□ -0.69
SHMT2-235ENST00000557740 RARRES2Q99969 163 aa10.76□□□□□ -0.69
SHMT2-235ENST00000557740 FNDC4Q9H6D8 234 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-235ENST00000557740 RPS10-NUDT3A0A1W2PQS6 291 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 DISC1C4P0D8 188 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 RPL5P46777 297 aaKnown RBP10.75□□□□□ -0.69
SHMT2-235ENST00000557740 DEFB131AP59861 70 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 SPCS3P61009 180 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 SURF2Q15527 256 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-235ENST00000557740 LEMD1Q68G75 181 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 FAAP20Q6NZ36 180 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 GPR141Q7Z602 305 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 LILRB2Q8N423 598 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 STXBP6Q8NFX7 210 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 OR4X1Q8NH49 305 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 SMIM4Q8WVI0 70 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 RBPMSQ93062 196 aaKnown RBP10.75□□□□□ -0.69
SHMT2-235ENST00000557740 MRPS26Q9BYN8 205 aaKnown RBP10.75□□□□□ -0.69
SHMT2-235ENST00000557740 MIXL1Q9H2W2 232 aa10.75□□□□□ -0.69
SHMT2-235ENST00000557740 C11orf68Q9H3H3 251 aaKnown RBP10.75□□□□□ -0.69
SHMT2-235ENST00000557740 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-235ENST00000557740 HTR2BP41595 481 aa10.74□□□□□ -0.69
SHMT2-235ENST00000557740 BSXQ3C1V8 233 aa10.74□□□□□ -0.69
SHMT2-235ENST00000557740 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
SHMT2-235ENST00000557740 PHLDA1Q8WV24 401 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-235ENST00000557740 TMEM230Q96A57 120 aa10.74□□□□□ -0.69
SHMT2-235ENST00000557740 MFFQ9GZY8 342 aa10.74□□□□□ -0.69
SHMT2-235ENST00000557740 NAA60Q9H7X0 242 aa10.74□□□□□ -0.69
SHMT2-235ENST00000557740 HEYLQ9NQ87 328 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-235ENST00000557740 MRPL36Q9P0J6 103 aaKnown RBP10.74□□□□□ -0.69
SHMT2-235ENST00000557740 CACNG5Q9UF02 275 aa10.74□□□□□ -0.69
SHMT2-235ENST00000557740 HYDINQ4G0P3 5121 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 TRAV30A0A087WSZ9 112 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 CEBPZOSA8MTT3 80 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 CTDSP2O14595 271 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 CDS2O95674 445 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 AKAIN1P0CW23 69 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 P2RY1P47900 373 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 DHODHQ02127 395 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 IL18Q14116 193 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 TMEM187Q14656 261 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 SPCS2Q15005 226 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 TIGITQ495A1 244 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 AARDQ4LEZ3 155 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 Q6ZRM9 215 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 STHQ8IWL8 128 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 FAM24BQ8N5W8 94 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 OR52E5Q8NH55 327 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 GLYATL2Q8WU03 294 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 GRAMD2BQ96HH9 432 aa10.73□□□□□ -0.69
SHMT2-235ENST00000557740 PLECQ15149 4684 aaKnown RBP10.72□□□□□ -0.69
SHMT2-235ENST00000557740 IGKV1-17P01599 117 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 SLC25A4P12235 298 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 CRYBB3P26998 211 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 EIF2B2P49770 351 aaKnown RBP10.72□□□□□ -0.69
SHMT2-235ENST00000557740 RND2P52198 227 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 RBMS2Q15434 407 aaKnown RBP10.72□□□□□ -0.69
SHMT2-235ENST00000557740 MLANAQ16655 118 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 TMEM268Q5VZI3 342 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 SLC24A4Q8NFF2 622 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 OR4C16Q8NGL9 310 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 LHFPL5Q8TAF8 219 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 C11orf45Q8TAV5 145 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 DIRAS2Q96HU8 199 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 PRRT1Q99946 306 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 RTBDNQ9BSG5 229 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-235ENST00000557740 FBXL17Q9UF56 701 aa10.72□□□□□ -0.69
SHMT2-235ENST00000557740 CRYM-AS1A6NIL9 109 aa10.71□□□□□ -0.69
SHMT2-235ENST00000557740 IFNA4P05014 189 aa10.71□□□□□ -0.69
SHMT2-235ENST00000557740 NANOS2P60321 138 aaKnown RBP10.71□□□□□ -0.69
SHMT2-235ENST00000557740 C2orf83Q53S99 150 aa10.71□□□□□ -0.69
SHMT2-235ENST00000557740 SELENOHQ8IZQ5 122 aaKnown RBP10.71□□□□□ -0.69
SHMT2-235ENST00000557740 OR1S2Q8NGQ3 325 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms