RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 DFFBO76075 338 aa12.78□□□□□ -0.36
PCNX4-213ENST00000556907 DLK1P80370 383 aa12.78□□□□□ -0.36
PCNX4-213ENST00000556907 KHDC1LQ5JSQ8 128 aa12.78□□□□□ -0.36
PCNX4-213ENST00000556907 OR8G2PQ6IF36 304 aa12.78□□□□□ -0.36
PCNX4-213ENST00000556907 LILRB2Q8N423 598 aa12.78□□□□□ -0.36
PCNX4-213ENST00000556907 TMEM217Q8N7C4 229 aa12.78□□□□□ -0.36
PCNX4-213ENST00000556907 OR5T1Q8NG75 326 aa12.78□□□□□ -0.36
PCNX4-213ENST00000556907 OR1L6Q8NGR2 347 aa12.78□□□□□ -0.36
PCNX4-213ENST00000556907 STOML3Q8TAV4 291 aa12.78□□□□□ -0.36
PCNX4-213ENST00000556907 RNASEH2CQ8TDP1 164 aaKnown RBP12.78□□□□□ -0.36
PCNX4-213ENST00000556907 ATP5SQ99766 215 aa12.78□□□□□ -0.36
PCNX4-213ENST00000556907 FNDC10F2Z333 226 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 IFNA4P05014 189 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 RPLP1P05386 114 aaKnown RBP12.77□□□□□ -0.37
PCNX4-213ENST00000556907 APELAP0DMC3 54 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 HIST1H1BP16401 226 aaKnown RBP12.77□□□□□ -0.37
PCNX4-213ENST00000556907 ZNF266Q14584 549 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 ATP6V1FQ16864 119 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 VWC2Q2TAL6 325 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 KLK9Q2XQG4 91 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 SLC51BQ86UW2 128 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 USMG5Q96IX5 58 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 TMEM147Q9BVK8 224 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 GGACTQ9BVM4 153 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 SMIM3Q9BZL3 60 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 CYTL1Q9NRR1 136 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 ZNF355PQ9NSJ1 428 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 KLK9Q9UKQ9 250 aa12.77□□□□□ -0.37
PCNX4-213ENST00000556907 ADARB2-AS1A8MUL3 147 aa12.76□□□□□ -0.37
PCNX4-213ENST00000556907 TRGV3P03979 118 aa12.76□□□□□ -0.37
PCNX4-213ENST00000556907 MFAP2P55001 183 aa12.76□□□□□ -0.37
PCNX4-213ENST00000556907 CLINT1Q14677 625 aa12.76□□□□□ -0.37
PCNX4-213ENST00000556907 NSUN5P1Q3KNT7 163 aa12.76□□□□□ -0.37
PCNX4-213ENST00000556907 FAM209BQ5JX69 171 aa12.76□□□□□ -0.37
PCNX4-213ENST00000556907 ZNF491Q8N8L2 437 aa12.76□□□□□ -0.37
PCNX4-213ENST00000556907 PARD6GQ9BYG4 376 aaPredicted RBP12.76□□□□□ -0.37
PCNX4-213ENST00000556907 KLK15Q9H2R5 256 aa12.76□□□□□ -0.37
PCNX4-213ENST00000556907 WFDC1Q9HC57 220 aa12.76□□□□□ -0.37
PCNX4-213ENST00000556907 BORCS7-ASMTA0A0B4J1R7 106 aa12.75□□□□□ -0.37
PCNX4-213ENST00000556907 TPPP2P59282 170 aa12.75□□□□□ -0.37
PCNX4-213ENST00000556907 RUNX1Q01196 453 aa12.75□□□□□ -0.37
PCNX4-213ENST00000556907 CD69Q07108 199 aa12.75□□□□□ -0.37
PCNX4-213ENST00000556907 EXOSC2Q13868 293 aaKnown RBP12.75□□□□□ -0.37
PCNX4-213ENST00000556907 KIAA0141Q14154 515 aaPredicted RBP12.75□□□□□ -0.37
PCNX4-213ENST00000556907 PRR31Q5SQ13 230 aa12.75□□□□□ -0.37
PCNX4-213ENST00000556907 C19orf35Q6ZS72 473 aa12.75□□□□□ -0.37
PCNX4-213ENST00000556907 UBAC2Q8NBM4 344 aa12.75□□□□□ -0.37
PCNX4-213ENST00000556907 C4orf3Q8WVX3 66 aa12.75□□□□□ -0.37
PCNX4-213ENST00000556907 ZNF471Q9BX82 626 aaPredicted RBP12.75□□□□□ -0.37
PCNX4-213ENST00000556907 THYN1Q9P016 225 aa12.75□□□□□ -0.37
PCNX4-213ENST00000556907 DMRT1Q9Y5R6 373 aa12.75□□□□□ -0.37
PCNX4-213ENST00000556907 DNHD1Q96M86 4753 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 IGLV11-55A0A075B6I3 123 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 TRBV9A0A0B4J1U6 114 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 FAM223BA6NKX1 122 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 NUDT19A8MXV4 375 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 JTBO76095 146 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 DEFA4P12838 97 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 TPT1P13693 172 aaKnown RBP12.74□□□□□ -0.37
PCNX4-213ENST00000556907 GPX4P36969 197 aaPredicted RBP12.74□□□□□ -0.37
PCNX4-213ENST00000556907 EIF5AP63241 154 aaKnown RBP12.74□□□□□ -0.37
PCNX4-213ENST00000556907 RPL7L1Q6DKI1 246 aaKnown RBP12.74□□□□□ -0.37
PCNX4-213ENST00000556907 SLC16A13Q7RTY0 426 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 FAM223AQ8IWN6 122 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 NECAP1Q8NC96 275 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 KLHL30-AS1Q8NEE0 82 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 MS4A10Q96PG2 267 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 ARV1Q9H2C2 271 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 UQCC1Q9NVA1 299 aa12.74□□□□□ -0.37
PCNX4-213ENST00000556907 UBE2L5PA0A1B0GUS4 154 aa12.73□□□□□ -0.37
PCNX4-213ENST00000556907 RPS10-NUDT3A0A1W2PQS6 291 aa12.73□□□□□ -0.37
PCNX4-213ENST00000556907 A0A1W2PRX2 142 aa12.73□□□□□ -0.37
PCNX4-213ENST00000556907 CACNG8Q8WXS5 425 aa12.73□□□□□ -0.37
PCNX4-213ENST00000556907 ST8SIA2Q92186 375 aa12.73□□□□□ -0.37
PCNX4-213ENST00000556907 FANCD2OSQ96PS1 177 aa12.73□□□□□ -0.37
PCNX4-213ENST00000556907 IFNA5P01569 189 aa12.72□□□□□ -0.37
PCNX4-213ENST00000556907 MYCNOSP40205 109 aa12.72□□□□□ -0.37
PCNX4-213ENST00000556907 OPRK1P41145 380 aa12.72□□□□□ -0.37
PCNX4-213ENST00000556907 ETFRF1Q6IPR1 90 aa12.72□□□□□ -0.37
PCNX4-213ENST00000556907 LCNL1Q6ZST4 164 aa12.72□□□□□ -0.37
PCNX4-213ENST00000556907 MISP3Q96FF7 219 aa12.72□□□□□ -0.37
PCNX4-213ENST00000556907 SLC35E1Q96K37 410 aa12.72□□□□□ -0.37
PCNX4-213ENST00000556907 GINS3Q9BRX5 216 aa12.72□□□□□ -0.37
PCNX4-213ENST00000556907 FNDC4Q9H6D8 234 aaPredicted RBP12.72□□□□□ -0.37
PCNX4-213ENST00000556907 WDR83OSQ9Y284 106 aa12.72□□□□□ -0.37
PCNX4-213ENST00000556907 I3L2K1 104 aa12.71□□□□□ -0.37
PCNX4-213ENST00000556907 I3L521 148 aa12.71□□□□□ -0.37
PCNX4-213ENST00000556907 LGALS1P09382 135 aaKnown RBP12.71□□□□□ -0.37
PCNX4-213ENST00000556907 RHOGP84095 191 aa12.71□□□□□ -0.37
PCNX4-213ENST00000556907 ATP5G2Q06055 141 aa12.71□□□□□ -0.37
PCNX4-213ENST00000556907 SLC25A24Q6NUK1 477 aa12.71□□□□□ -0.37
PCNX4-213ENST00000556907 BAP18Q8IXM2 172 aa12.71□□□□□ -0.37
PCNX4-213ENST00000556907 PHYHIPLQ96FC7 376 aa12.71□□□□□ -0.37
PCNX4-213ENST00000556907 WDR61Q9GZS3 305 aaKnown RBP12.71□□□□□ -0.37
PCNX4-213ENST00000556907 K7EIM0 57 aa12.7□□□□□ -0.38
PCNX4-213ENST00000556907 MPDU1O75352 247 aa12.7□□□□□ -0.38
PCNX4-213ENST00000556907 MT-CO2P00403 227 aa12.7□□□□□ -0.38
PCNX4-213ENST00000556907 PF4P02776 101 aa12.7□□□□□ -0.38
PCNX4-213ENST00000556907 C8orf86Q6ZUL3 223 aa12.7□□□□□ -0.38
PCNX4-213ENST00000556907 CXorf58Q96LI9 332 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms