RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 NOL3O60936 208 aaKnown RBP4.75□□□□□ -1.65
TMEM260-209ENST00000556079 DHFRP00374 187 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 IFNA17P01571 189 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 C8orf88P0DMB2 117 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 AKR1C4P17516 323 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 TBPP20226 339 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 EWSR1Q01844 656 aaKnown RBP eCLIP4.75□□□□□ -1.65
TMEM260-209ENST00000556079 TMEM187Q14656 261 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 ODF3L2Q3SX64 289 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 FAM106AQ4KMX7 169 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 FAM209BQ5JX69 171 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 TMEM268Q5VZI3 342 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 LPCAT3Q6P1A2 487 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 LYZL2Q7Z4W2 148 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 GTSCR1Q86UQ5 136 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 WFDC3Q8IUB2 231 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 GBGT1Q8N5D6 347 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 FAM24BQ8N5W8 94 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 OR1P1Q8NH06 330 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 RNASE11Q8TAA1 199 aaKnown RBP4.75□□□□□ -1.65
TMEM260-209ENST00000556079 BORCS5Q969J3 196 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 CXorf58Q96LI9 332 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 RNF2Q99496 336 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 SRSF8Q9BRL6 282 aaKnown RBP4.75□□□□□ -1.65
TMEM260-209ENST00000556079 AIFM2Q9BRQ8 373 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 TMEM222Q9H0R3 208 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 TUBA4BQ9H853 241 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 C14orf166Q9Y224 244 aaKnown RBP4.75□□□□□ -1.65
TMEM260-209ENST00000556079 KIAA1109Q2LD37 5005 aa4.75□□□□□ -1.65
TMEM260-209ENST00000556079 NUPL2O15504 423 aaKnown RBP4.74□□□□□ -1.65
TMEM260-209ENST00000556079 TPPPO94811 219 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 YIF1AO95070 293 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 CDS2O95674 445 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 RPL35AP18077 110 aaKnown RBP4.74□□□□□ -1.65
TMEM260-209ENST00000556079 S100GP29377 79 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 CCR6P51684 374 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 SUMO1P63165 101 aaKnown RBP4.74□□□□□ -1.65
TMEM260-209ENST00000556079 BAK1Q16611 211 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 ANKRD55Q3KP44 614 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 TIGITQ495A1 244 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 TOMM20LQ6UXN7 152 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 TMED4Q7Z7H5 227 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 CCDC190Q86UF4 302 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 APRG1Q8IVJ8 170 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 CCDC71LQ8N9Z2 235 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 ZNF114Q8NC26 417 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 OR52B4Q8NGK2 314 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 ZFAND1Q8TCF1 268 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 ST8SIA2Q92186 375 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 BSCL2Q96G97 398 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-209ENST00000556079 ZNF486Q96H40 463 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-209ENST00000556079 TMEM56Q96MV1 263 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 TSC22D3Q99576 134 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 SDHCQ99643 169 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-209ENST00000556079 BCL7BQ9BQE9 202 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 HIPK2Q9H2X6 1198 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 EDA2RQ9HAV5 297 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 FAM212BQ9NTI7 297 aaPredicted RBP4.74□□□□□ -1.65
TMEM260-209ENST00000556079 RSL24D1Q9UHA3 163 aaKnown RBP4.74□□□□□ -1.65
TMEM260-209ENST00000556079 FLVCR2Q9UPI3 526 aa4.74□□□□□ -1.65
TMEM260-209ENST00000556079 DNAH2Q9P225 4427 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 IGHV7-4-1A0A0J9YVY3 117 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 A8MZ25 164 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 NDUFA4O00483 81 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 CHEK1O14757 476 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 FGF2P09038 288 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 MFAP4P55083 255 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 MRPS10P82664 201 aaKnown RBP4.73□□□□□ -1.65
TMEM260-209ENST00000556079 BSXQ3C1V8 233 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 PVRIGQ6DKI7 326 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 THOC7Q6I9Y2 204 aaKnown RBP4.73□□□□□ -1.65
TMEM260-209ENST00000556079 CADM3Q8N126 398 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 OR1L6Q8NGR2 347 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 OR2K2Q8NGT1 345 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 RBPMSQ93062 196 aaKnown RBP4.73□□□□□ -1.65
TMEM260-209ENST00000556079 RHPN1-AS1Q9BWJ2 59 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 SRRQ9GZT4 340 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 RBKSQ9H477 322 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 DAZ1Q9NQZ3 744 aaKnown RBP4.73□□□□□ -1.65
TMEM260-209ENST00000556079 SLC2A8Q9NY64 477 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 FKBP11Q9NYL4 201 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 TECRQ9NZ01 308 aaKnown RBP4.73□□□□□ -1.65
TMEM260-209ENST00000556079 SMPXQ9UHP9 88 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 UFC1Q9Y3C8 167 aa4.73□□□□□ -1.65
TMEM260-209ENST00000556079 PUS1Q9Y606 427 aaKnown RBP eCLIP4.73□□□□□ -1.65
TMEM260-209ENST00000556079 CEBPZOSA8MTT3 80 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 GNG7O60262 68 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 TMEM50AO95807 157 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 IGKV1-17P01599 117 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 PRB4P10163 310 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 IAPPP10997 89 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 FCGR2BP31994 310 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 BTCP35070 178 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 OPRK1P41145 380 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 RND2P52198 227 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 DEFB1P60022 68 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 UBE2MP61081 183 aaKnown RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 ERHP84090 104 aaKnown RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 SSBP1Q04837 148 aaKnown RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 PPP1R1AQ13522 171 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms